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Volume 14, Issue 3
March 2024
EISSN 2160-1836

Volume 14, Issue 3, March 2024

Investigation

Yuhao Wang and others
G3 Genes|Genomes|Genetics, Volume 14, Issue 3, March 2024, jkad263, https://doi.org/10.1093/g3journal/jkad263
Emily S A Wolf and others
G3 Genes|Genomes|Genetics, Volume 14, Issue 3, March 2024, jkad285, https://doi.org/10.1093/g3journal/jkad285

Select accessions of the cereal crop sorghum form mucilage-producing adventitious nodal roots that harbor nitrogen-fixing bacteria, which could contribute to agricultural sustainability by reducing the reliance on chemical fertilizers. Sorghum is gaining global interest as a versatile and climate-resilient crop. Wolf et al. report an effort to determine the genetic and environmental factors contributing to the formation of these so-called aerial roots as the basis for breeding programs aimed at sustainable production. Despite considerable phenotypic variation, the authors identify loci associated with the number of nodes with aerial roots and aerial root diameter.

Zhikai Yang and others
G3 Genes|Genomes|Genetics, Volume 14, Issue 3, March 2024, jkad286, https://doi.org/10.1093/g3journal/jkad286
A Cristina Barragan and others
G3 Genes|Genomes|Genetics, Volume 14, Issue 3, March 2024, jkad290, https://doi.org/10.1093/g3journal/jkad290

Barragan et al. survey the progeny of wild Arabidopsis arenosa plants to determine the frequency of potentially deleterious phenotypes in natural populations, investigating the genetic basis of several such cases. They find a number of defects likely to decrease fitness in the wild; in some cases, those defects were associated with extended homozygosity at particular genomic regions. This study provides a methodological roadmap for detecting and comparing genetic architectures linked to deleterious phenotypes in wild self-incompatible plant populations.

Riddhiman K Garge and others
G3 Genes|Genomes|Genetics, Volume 14, Issue 3, March 2024, jkad293, https://doi.org/10.1093/g3journal/jkad293
Holly J Thorpe and others
G3 Genes|Genomes|Genetics, Volume 14, Issue 3, March 2024, jkad291, https://doi.org/10.1093/g3journal/jkad291

PIGA-CDG is a rare genetic disorder of glycosylation characterized by seizures, intellectual and developmental delay, and congenital malformations. Here, Thorpe, Owings, Aziz et al. generate and characterize several Drosophila models of PIGA-CDG. These models faithfully recapitulate different patient phenotypes, including movement disorder and seizures, indicating that Drosophila is a good model for PIGA-CDG and potentially other glycosylation disorders.

Huakun Shangguan and others
G3 Genes|Genomes|Genetics, Volume 14, Issue 3, March 2024, jkad298, https://doi.org/10.1093/g3journal/jkad298
Laura D Mathies and others
G3 Genes|Genomes|Genetics, Volume 14, Issue 3, March 2024, jkad297, https://doi.org/10.1093/g3journal/jkad297
William Vilas Boas Nunes and others
G3 Genes|Genomes|Genetics, Volume 14, Issue 3, March 2024, jkad299, https://doi.org/10.1093/g3journal/jkad299
Clara T Rehmann and others
G3 Genes|Genomes|Genetics, Volume 14, Issue 3, March 2024, jkae008, https://doi.org/10.1093/g3journal/jkae008
Seung Young Lee and others
G3 Genes|Genomes|Genetics, Volume 14, Issue 3, March 2024, jkad300, https://doi.org/10.1093/g3journal/jkad300
Elizabeth R Everman and Stuart J Macdonald
G3 Genes|Genomes|Genetics, Volume 14, Issue 3, March 2024, jkae015, https://doi.org/10.1093/g3journal/jkae015
Robert A Brinzer and others
G3 Genes|Genomes|Genetics, Volume 14, Issue 3, March 2024, jkae009, https://doi.org/10.1093/g3journal/jkae009
Ethan W Rohrbach and others
G3 Genes|Genomes|Genetics, Volume 14, Issue 3, March 2024, jkae012, https://doi.org/10.1093/g3journal/jkae012
Brianna D Silver and others
G3 Genes|Genomes|Genetics, Volume 14, Issue 3, March 2024, jkae016, https://doi.org/10.1093/g3journal/jkae016
Saulo F S Chaves and others
G3 Genes|Genomes|Genetics, Volume 14, Issue 3, March 2024, jkae013, https://doi.org/10.1093/g3journal/jkae013
Jan Breuer and others
G3 Genes|Genomes|Genetics, Volume 14, Issue 3, March 2024, jkae019, https://doi.org/10.1093/g3journal/jkae019

Genome Report

Anouk C van Westerhoven and others
G3 Genes|Genomes|Genetics, Volume 14, Issue 3, March 2024, jkad262, https://doi.org/10.1093/g3journal/jkad262
Isabelle Massaro and others
G3 Genes|Genomes|Genetics, Volume 14, Issue 3, March 2024, jkad284, https://doi.org/10.1093/g3journal/jkad284
Kate L Ostevik and others
G3 Genes|Genomes|Genetics, Volume 14, Issue 3, March 2024, jkad296, https://doi.org/10.1093/g3journal/jkad296
Alan Yocca and others
G3 Genes|Genomes|Genetics, Volume 14, Issue 3, March 2024, jkae003, https://doi.org/10.1093/g3journal/jkae003

Yocca et al. present a fully-phased chromosome-scale genome assembly of the European pear P. communis “d'Anjou”. This assembly will allow for genome-assisted breeding and will thus increase the pace of improvement for this relatively recently-cultivated, economically-important tree species. Additionally, comparative genomic studies within the Rose family (Rosaceae) may provide insight into the evolutionary history of the European pear. The genome assembly, annotation, and analyses were produced in a semester-long undergraduate and graduate course as part of the ACTG: American Campus Tree Genomes Initiative.

Laura Iris Regina Fuchs and others
G3 Genes|Genomes|Genetics, Volume 14, Issue 3, March 2024, jkad282, https://doi.org/10.1093/g3journal/jkad282
Chelsea Skojec and others
G3 Genes|Genomes|Genetics, Volume 14, Issue 3, March 2024, jkad292, https://doi.org/10.1093/g3journal/jkad292
Kaede Hirabayashi and others
G3 Genes|Genomes|Genetics, Volume 14, Issue 3, March 2024, jkad294, https://doi.org/10.1093/g3journal/jkad294
Gabriela Pozo and others
G3 Genes|Genomes|Genetics, Volume 14, Issue 3, March 2024, jkae014, https://doi.org/10.1093/g3journal/jkae014

Mutant Screen Report

Miguel Pacheco and others
G3 Genes|Genomes|Genetics, Volume 14, Issue 3, March 2024, jkad295, https://doi.org/10.1093/g3journal/jkad295
Himal Roka Pun and Xantha Karp
G3 Genes|Genomes|Genetics, Volume 14, Issue 3, March 2024, jkae007, https://doi.org/10.1093/g3journal/jkae007

Software and Data Resources

Marco Lopez-Cruz and others
G3 Genes|Genomes|Genetics, Volume 14, Issue 3, March 2024, jkae001, https://doi.org/10.1093/g3journal/jkae001
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