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Volume 628 Issue 8006, 4 April 2024
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Volume 628 Issue 8006, 4 April 2024

Close connections

Human physiology is affected by the huge range of microorganisms that make up the microbiome, but the molecular bases for these effects are largely unknown. In this week’s issue, Noah Palm, Aaron Ring and colleagues present an atlas of interactions between human tissues and the microbiota. The researchers devised a system called BASEHIT that uses yeast clones to display human extracellular and secreted proteins (exoproteins), which are then screened for interactions with hundreds of commensal bacteria known to inhabit different tissues in the human body. The resulting interactome revealed thousands of previously unknown molecular-level host–microbe interactions. The cover shows an artist’s impression of one such interaction between a bacterium and a BASEHIT yeast cell.

Cover image: Eric D. Smith

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  • News & Views

    • The quality of a bird’s song during courtship can influence whether a male is selected as a mate. An innovative approach using machine learning offers a way to analyse the characteristics of birdsong.

      • Kate T. Snyder
      • Nicole Creanza
      News & Views
    • A smart adhesive patch that wicks sweat away from electronics embedded in its centre offers comfortable and reliable sensing of the wearer’s biometrics or environment without the risk of perspiration damaging the devices.

      • Yifan Rao
      • Nanshu Lu
      News & Views
    • A population of neurons that engages mechanisms of the innate immune system during memory formation has been uncovered in mice. Surprisingly, inflammatory signalling might pave the way for long-term memory.

      • Benjamin A. Kelvington
      • Ted Abel
      News & Views
    • The idea that three different free radicals could be used together to carry out specific steps in a chemical reaction has long been implausible. A ‘radical sorting’ strategy now achieves this feat to make organic molecules.

      • Kenneth F. Clark
      • John A. Murphy
      News & Views
    • Depleting an expanding pool of aberrant stem cells in aged mice using antibody therapy has been shown to rebalance blood cell production, diminish age-associated inflammation and strengthen acquired immune responses.

      • Yasar Arfat T. Kasu
      • Robert A. J. Signer
      News & Views
    • Words and images experienced by an infant wearing sensors during their daily life have led to efficient machine learning, pointing to the power of multimodal training signals and to the potentially exploitable statistics of real-life experience.

      • Linda B. Smith
      News & Views
  • Reviews

  • Articles

    • JWST/NIRSpec observations of Abell2744-QSO1 show a high black-hole-to-host mass ratio in the early Universe, which indicates that we are seeing the black hole in a phase of rapid growth, accreting at 30% of the Eddington limit.

      • Lukas J. Furtak
      • Ivo Labbé
      • Christina C. Williams
      Article
    • Spatial and kinematic analysis of the solar neighbourhood shows that the Radcliffe Wave, a wave-shaped chain of star-forming gas clouds, is oscillating through the Galactic plane while also drifting radially away from the Galactic Centre.

      • Ralf Konietzka
      • Alyssa A. Goodman
      • Núria Miret-Roig
      Article
    • By stabilizing a stationary giant quantum vortex in superfluid 4He and introducing a minimally invasive way to characterize the vortex flow, intricate wave–vortex interactions are shown to simulate black hole ringdown physics.

      • Patrik Švančara
      • Pietro Smaniotto
      • Silke Weinfurtner
      Article Open Access
    • Fidelity benchmarking of an analogue quantum simulator reaches a high-entanglement regime where exact classical simulation of quantum systems becomes impractical, and enables a new method for evaluating the mixed-state entanglement of quantum devices.

      • Adam L. Shaw
      • Zhuo Chen
      • Manuel Endres
      Article Open Access
    • Through inelastic light scattering chiral spin-2 long-wavelength magnetorotons are observed, revealing chiral graviton modes in fractional quantum Hall states and aiding in understanding the quantum metric impacts in topological correlated systems.

      • Jiehui Liang
      • Ziyu Liu
      • Aron Pinczuk
      Article
    • We report a strategy that yields thermally and hydrothermally stable silicates by expansion of a one-dimensional silicate chain with an intercalated silylating agent that separates and connects the chains.

      • Zihao Rei Gao
      • Huajian Yu
      • Miguel A. Camblor
      Article
    • We use bimolecular homolytic substitution catalysis to sort an electrophilic radical and a nucleophilic radical across an unactivated alkene, accelerating access to pharmaceutically relevant C(sp3)-rich molecules and defining a mechanistic approach for alkene dialkylation.

      • Johnny Z. Wang
      • William L. Lyon
      • David W. C. MacMillan
      Article
    • Heat flows through thin, crack-like geo-compartments are shown to purify previously mixed compounds and enhance their reactivity, providing a selective mechanism for separating molecules relevant to the chemical origins of life.

      • Thomas Matreux
      • Paula Aikkila
      • Christof B. Mast
      Article Open Access
    • A detailed analysis of male song structure in zebra finches shows how females use particular features of songs as indicators of male quality in species that learn only one song.

      • Danyal Alam
      • Fayha Zia
      • Todd F. Roberts
      Article
    • In Caenorhabditis tropicalis, selective expression of genetic alleles from one parent but not the other can arise from maternally inherited small transcripts acting via the PIWI-interacting RNA host defence pathway.

      • Pinelopi Pliota
      • Hana Marvanova
      • Alejandro Burga
      Article Open Access
    • A meta-analysis of genome-wide association studies for 233 circulating metabolites from 33 cohorts reveals more than 400 loci and suggests probable causal genes, providing insights into metabolic pathways and disease aetiology.

      • Minna K. Karjalainen
      • Savita Karthikeyan
      • Johannes Kettunen
      Article Open Access
    • Through modelling, neural recordings and behavioural experiments, a study shows that individual electric fish use electrical pulses of conspecifics to extend their electrolocation range, discriminate objects and increase information transmission.

      • Federico Pedraja
      • Nathaniel B. Sawtell
      Article
    • Learning results in persistent double-stranded DNA breaks, nuclear rupture and release of DNA fragments and histones within hippocampal CA1 neurons that, following TLR9-mediated DNA damage repair, results in their recruitment to memory circuits.

      • Vladimir Jovasevic
      • Elizabeth M. Wood
      • Jelena Radulovic
      Article Open Access
    • A study provides evidence for a shared lymphatic circuit that connects the posterior eye and the brain, allowing the generation of immune responses to protect the CNS against pathogens and tumours following intravitreal immunization.

      • Xiangyun Yin
      • Sophia Zhang
      • Eric Song
      Article Open Access
    • Cryo-electron microscopy structures of human RAD51 in complex with the nucleosome show that RAD51 can adopt two conformations—rings and filaments—and reveal how RAD51 binds to the nucleosome through its N-terminal lobe domain.

      • Takuro Shioi
      • Suguru Hatazawa
      • Hitoshi Kurumizaka
      Article Open Access
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