Forthcoming Articles

This site is managed by Brian Golding. Note that entries are retained for only thirty days. Currently only GBE, JME, MBE, and PNAS (selected articles), are provided.

Other online access

- Bioinformatics - Biometrika - Evolution - Evol Applications
- GBE - Genome Research - Genetics - J.Bioinfo. & Comp. Biol.
- J.Mol.Evol. - MBE - Mol. Phylogenetics & Evol - Nature
- Nucl. Acids Res. - PNAS - Science - Systematic Biology


Articles added in the last thirty days:

May 25 08:00Genomic divergence and adaptive convergence in Drosophila simulans from Evolution Canyon, Israel - Lin Kang et al. (PNAS)
May 25 08:00Comparative transcriptomics of 3 high-altitude passerine birds and their low-altitude relatives - Yan Hao et al. (PNAS)
May 25 08:00Evolutionary Modes in Protein Observable Space: The Case of Thioredoxins - Sara Del Galdo et al. (JME)
May 25 08:00A Fast Likelihood Method to Reconstruct and Visualize Ancestral Scenarios - Sohta A Ishikawa, Anna Zhukova, Wataru Iwasaki, Olivier Gascuel (MBE)
May 24 08:00Resolving the insertion sites of polymorphic duplications reveals a HERC2 haplotype under selection - M Saitou, O Gokcumen (GBE)
May 24 08:00The known, the new, and a possible surprise. A re-evaluation of the nucleomorph-encoded proteome of cryptophytes - Stefan Zauner, Thomas Heimerl, Daniel Moog, Uwe G Maier (GBE)
May 24 08:00Divergent allometric trajectories in gene expression and co-expression produce species differences in sympatrically speciating Midas cichlid fish - Carmelo Fruciano, Axel Meyer, Paolo Franchini (GBE)
May 23 08:00Return to the Sea, Get Huge, Beat Cancer: An Analysis of Cetacean Genomes Including an Assembly for the Humpback Whale (Megaptera novaeangliae) - Marc Tollis et al. (MBE)
May 23 08:00Joint maximum likelihood of phylogeny and ancestral states is not consistent - David A Shaw, Vu C Dinh, Frederick A Matsen, IV (MBE)
May 22 08:00Parallel molecular evolution in pathways, genes, and sites in high-elevation hummingbirds revealed by comparative transcriptomics - Marisa C W Lim, Christopher C Witt, Catherine H Graham, Liliana M Dávalos (GBE)
May 22 08:00The role of chromatin accessibility in cis-regulatory evolution - Pei-Chen Peng et al. (GBE)
May 22 08:00The genomic complexity of a large inversion in great tits - Vinicius H da Silva et al. (GBE)
May 22 08:00Modelling structural constraints on protein evolution via side-chain conformational states - Umberto Perron et al. (MBE)
May 21 20:00River valleys shaped the maternal genetic landscape of Han Chinese - Yu-Chun Li et al. (MBE)
May 21 08:00Ancestral admixture is the main determinant of global biodiversity in fission yeast - Sergio Tusso et al. (MBE)
May 21 08:00Many options, few solutions: over 60 million years snakes converged on a few optimal venom formulations - Agneesh Barua, Alexander S Mikheyev (MBE)
May 21 08:00Elucidation of Codon Usage Signatures across the Domains of Life - Eva Maria Novoa, Irwin Jungreis, Olivier Jaillon, Manolis Kellis (MBE)
May 21 08:00Evolution of gene expression during a transition from environmental to genetic sex determination - Cécile Molinier et al. (MBE)
May 20 08:00Unraveling the LRC evolution in mammals: IGSF1 and A1BG provide the keys - Sergey V Guselnikov, Alexander V Taranin (GBE)
May 20 08:00Genome-wide patterns of gene expression in a wild primate indicate species-specific mechanisms associated with tolerance to natural simian immunodeficiency virus infection - Noah D Simons et al. (GBE)
May 20 08:00The parallel molecular adaptations to the Antarctic cold environment in two psychrophilic green algae - Zhenhua Zhang et al. (GBE)
May 17 08:00Response to Comment on "microRNAs in the Same Clusters Evolve to Coordinately Regulate Functionally Related Genes" - Yirong Wang, Hong Zhang, Jian Lu (MBE)
May 17 08:00Comment on "microRNAs in the Same Clusters Evolve to Coordinately Regulate Functionally Related Genes" - Antonio Marco (MBE)
May 16 12:00PopNetD3 - A network based web resource for exploring population structure - Javi Zhang, John Parkinson (GBE)
May 16 08:00Protein melting temperature cannot fully assess whether protein folding free energy underlies the universal abundance-evolutionary rate correlation seen in proteins - Rostam M Razban (MBE)
May 14 08:00Ligand-Binding-Site Structure Shapes Allosteric Signal Transduction and the Evolution of Allostery in Protein Complexes - György Abrusán, Joseph A Marsh (MBE)
May 13 20:00An ammonite trapped in Burmese amber - Tingting Yu et al. (PNAS)
May 11 12:00Intraspecific Variation in Microsatellite Mutation Profiles in Daphnia magna - Eddie K H Ho et al. (MBE)
May 11 12:00Human Migration and the Spread of the Nematode Parasite Wuchereria bancrofti - Scott T Small et al. (MBE)
May 11 12:00The legacy of sexual ancestors in phenotypic variability, gene expression and homoeolog regulation of asexual hybrids and polyploids - Oldřich Bartoš et al. (MBE)
May 11 12:00Fitness Landscape of the Fission Yeast Genome - Leanne Grech et al. (MBE)
May 11 12:00Molecular evolution in large steps - Codon substitutions under positive selection - Qingjian Chen et al. (MBE)
May 11 12:00Robust method for detecting convergent shifts in evolutionary rates - Raghavendran Partha, Amanda Kowalczyk, Nathan Clark, Maria Chikina (MBE)
May 11 08:00Revisiting the evolution and taxonomy of Clostridia, a phylogenomic update - Pablo Cruz-Morales et al. (GBE)
May 11 08:00Germline Structural Variations Are Preferential Sites of DNA Replication Timing Plasticity during Development - Michelle L Hulke, Joseph C Siefert, Christopher L Sansam, Amnon Koren (GBE)
May 11 08:00Genome plasticity in Papillomaviruses and de novo emergence of E5 oncogenes - Anouk Willemsen, Marta Félez-Sánchez, Ignacio G Bravo (GBE)
May 11 08:00Birth-and-death evolution of the fatty acyl-CoA reductase (FAR) gene family and diversification of cuticular hydrocarbon synthesis in Drosophila - Cédric Finet et al. (GBE)
May 9 12:00Positive selection evidence in xylose-related genes suggests methylglyoxal reductase as a target for the improvement of yeasts' fermentation in industry - Guilherme Borelli et al. (GBE)
May 9 12:00Signatures of Divergence, Invasiveness, and Terrestrialization Revealed by Four Apple Snail Genomes - Jin Sun et al. (MBE)
May 9 12:00Return to the sea, get huge, beat cancer: an analysis of cetacean genomes including an assembly for the humpback whale (Megaptera novaeangliae) - Marc Tollis et al. (MBE)
May 8 12:00Cis- and trans-acting variants contribute to survivorship in a naïve Drosophila melanogaster population exposed to ryanoid insecticides - Llewellyn Green, Paul Battlay, Alexandre Fournier-Level, Robert T. Good, Charles Robin (PNAS)
May 8 08:00Remarkable genome stability among emm1 group A Streptococcus in Belgium over 19 years - Jasmine Coppens et al. (GBE)
May 7 12:00Considering adaptive genetic variation in climate change vulnerability assessment reduces species range loss projections - Orly Razgour et al. (PNAS)
May 7 08:00PhyloToL: A taxon/gene rich phylogenomic pipeline to explore genome evolution of diverse eukaryotes - M A Cerón-Romero et al. (MBE)
May 6 12:00Complete genome sequences of Xanthomonas axonopodis pv. glycines isolates from the USA and Thailand reveal conserved transcription activator-like effectors - Sara C D Carpenter et al. (GBE)
May 6 12:00Unprecedented parallel photosynthetic losses in a heterotrophic orchid genus - Craig F Barrett, Brandon T Sinn, Aaron H Kennedy (MBE)
May 6 12:00Limits to compensatory mutations: Insights from temperature-sensitive alleles - Katarzyna Tomala, Piotr Zrebiec, Daniel L Hartl (MBE)
May 6 12:00Limited evolutionary conservation of the phenotypic effects of antibiotic resistance mutations - Gábor Apjok et al. (MBE)
May 6 12:00Estimating epidemic incidence and prevalence from genomic data - Timothy G Vaughan et al. (MBE)
May 3 08:00Inference of Ancient Whole-Genome Duplications and the Evolution of Gene Duplication and Loss Rates - Arthur Zwaenepoel, Yves Van de Peer (MBE)
May 3 08:00Eggplant Domestication: Pervasive Gene Flow, Feralization, and Transcriptomic Divergence - Anna Page, Jane Gibson, Rachel S Meyer, Mark A Chapman (MBE)
Apr 30 20:00Eggplant domestication: pervasive gene flow, feralisation and transcriptomic divergence - Anna Page, Jane Gibson, Rachel S Meyer, Mark A Chapman (MBE)
Apr 30 12:00Germline-restricted chromosome (GRC) is widespread among songbirds - Anna A. Torgasheva et al. (PNAS)
Apr 30 12:00Altered localization of hybrid incompatibility proteins in Drosophila - J C Cooper et al. (MBE)
Apr 27 12:00The whole genome sequence of the coral Acropora millepora - Hua Ying et al. (GBE)
Apr 27 12:00Divergent fine-scale recombination landscapes between a freshwater and marine population of threespine stickleback fish - Alice F Shanfelter, Sophie L Archambeault, Michael A White (GBE)
Apr 27 12:00Evolutionary Relatedness and Classification of Tumour-Inducing and Opine-Catabolic Plasmids in Three Rhizobium rhizogenes Strains Isolated from the Same Crown Gall Tumour - Nemanja Kuzmanović, Joanna Puławska (GBE)
Apr 27 12:00Ancient polyploidy and genome evolution in palms - Craig F Barrett et al. (GBE)
Apr 27 12:00Aneuploidy enables cross-adaptation to unrelated drugs - Feng Yang et al. (MBE)
Apr 27 12:00Shared signature dynamics tempered by local fluctuations enables fold adaptability and specificity - She Zhang, Hongchun Li, James M Krieger, Ivet Bahar (MBE)
Apr 27 08:00Referee: reference assembly quality scores - Gregg W C Thomas, Matthew W Hahn (GBE)
Apr 27 08:00Adaptation and conservation throughout the Drosophila melanogaster life-cycle - Marta Coronado-Zamora et al. (GBE)
Apr 27 08:00Genomic Plasticity Mediated by Transposable Elements in the Plant Pathogenic Fungus Colletotrichum higginsianum - Ayako Tsushima et al. (GBE)
Apr 27 08:00Social parasitism in the honeybee (Apis mellifera) is not controlled by a single SNP - Matthew J Christmas, Nicholas M A Smith, Benjamin P Oldroyd, Matthew T Webster (MBE)
Apr 27 08:00Transposable elements are important contributors to standing variation in gene expression in Capsella grandiflora - Jasmina Uzunović, Emily B Josephs, John R Stinchcombe, Stephen I Wright (MBE)
Apr 27 08:00Additive traits lead to feeding advantage and reproductive isolation, promoting homoploid hybrid speciation - Juan F Masello et al. (MBE)
Apr 26 08:00Family quarrels in seeds and rapid adaptive evolution in Arabidopsis - Katherine S. Geist, Joan E. Strassmann, David C. Queller (PNAS)