Forthcoming Articles

This site is managed by Brian Golding. Note that entries are retained for only thirty days. Currently only GBE, JME, MBE, and PNAS (selected articles), are provided.

Other online access

- Bioinformatics - Biometrika - Evolution - Evol Applications
- GBE - Genome Research - Genetics - J.Bioinfo. & Comp. Biol.
- J.Mol.Evol. - MBE - Mol. Phylogenetics & Evol - Nature
- Nucl. Acids Res. - PNAS - Science - Systematic Biology


Articles added in the last thirty days:

Mar 19 12:00Conservation, divergence and functions of centromeric satellite DNA families in the Bovidae - A Escudeiro et al. (GBE)
Mar 19 12:00Primate piRNA Cluster Evolution Suggests Limited Relevance of Pseudogenes in piRNA-Mediated Gene Regulation - Daniel Gebert, Hans Zischler, David Rosenkranz (GBE)
Mar 19 12:00Amplification Dynamics of Platy-1 retrotransposons in the Cebidae Platyrrhine lineage - Jessica M Storer et al. (GBE)
Mar 19 08:00Fine-scale characterization of genomic structural variation in the human genome reveals adaptive and biomedically relevant hotspots - Yen-Lung Lin, Omer Gokcumen (GBE)
Mar 19 08:00Antiquity of forelimb ecomorphological diversity in the mammalian stem lineage (Synapsida) - Jacqueline K. Lungmus, Kenneth D. Angielczyk (PNAS)
Mar 18 12:00Testing Empirical Support for Evolutionary Models that Root the Tree of Life - Derek Caetano-Anollés et al. (JME)
Mar 16 08:00Genomes of skipper butterflies reveal extensive convergence of wing patterns - Wenlin Li et al. (PNAS)
Mar 16 08:00Transposable elements drive rapid phenotypic variation in Capsella rubella - Xiao-Min Niu et al. (PNAS)
Mar 15 08:00Transmission trees on a known pathogen phylogeny: enumeration and sampling - Matthew Hall, Caroline Colijn (MBE)
Mar 14 08:00Fractional coalescent - Somayeh Mashayekhi, Peter Beerli (PNAS)
Mar 14 08:00Genomic plasticity associated with antimicrobial resistance in Vibrio cholerae - Jyoti Verma et al. (PNAS)
Mar 14 08:00Shared Ancient Sex Chromosomes in Varanids, Beaded Lizards, and Alligator Lizards - Michail Rovatsos, Ivan Rehák, Petr Velenskɓ, Lukáš Kratochvíl (MBE)
Mar 13 12:00Sex-biased gene expression and dosage compensation on the Artemia franciscana Z-chromosome - Ann Kathrin Huylmans et al. (GBE)
Mar 13 12:00Evolutionary rates of bumblebee genomes are faster at lower elevations - Gonghua Lin et al. (MBE)
Mar 13 12:00The genome of Drosophila innubila reveals lineage-specific patterns of selection in immune genes - Tom Hill, Boryana S Koseva, Robert L Unckless (MBE)
Mar 13 08:00Complex gene loss and duplication events have facilitated the evolution of multiple loricrin genes in diverse bird species - Anthony C Davis, Matthew J Greenwold, Roger H Sawyer (GBE)
Mar 13 08:00Visualization of Genetic Drift Processes Using the Conserved Collagen 1α1 GXY Domain - Anne J. Kleinnijenhuis (JME)
Mar 13 08:00Emergence of a Thrombospondin Superfamily at the Origin of Metazoans - Deborah K Shoemark et al. (MBE)
Mar 12 20:00Parallel speciation of wild rice associated with habitat shifts - Zhe Cai et al. (MBE)
Mar 12 08:00Codon usage differences among genes expressed in different tissues of Drosophila melanogaster - Bryan L Payne, David Alvarez-Ponce (GBE)
Mar 12 08:00Relative mutation rates in nucleomorph-bearing algae - C J Grisdale, D R Smith, J M Archibald (GBE)
Mar 12 08:00Sponges lack ParaHox genes - Claudia C Pastrana, Melissa B DeBiasse, Joseph F Ryan (GBE)
Mar 12 08:00Polyandrous bee provides extended offspring care biparentally as an alternative to monandry based eusociality - Michael Mikát et al. (PNAS)
Mar 11 16:00Adaptive Landscapes in the Age of Synthetic Biology - Xiao Yi, Antony M Dean (MBE)
Mar 11 08:00Phylogenetic Clustering by Linear Integer Programming (PhyCLIP) - Alvin X Han et al. (MBE)
Mar 9 12:00Cluster-transition determining sites underlying the antigenic evolution of seasonal influenza viruses - Lijun Quan et al. (MBE)
Mar 9 12:00Weak regulation of many targets is cumulatively powerful- a reply to Seitz on microRNA functionality - Yixin Zhao, Xu Shen, Tian Tang, Chung-I Wu (MBE)
Mar 9 12:00Bayesian detection of convergent rate changes of conserved noncoding elements on phylogenetic trees - Zhirui Hu, Timothy B Sackton, Scott V Edwards, Jun S Liu (MBE)
Mar 9 12:00On the number of functional microRNA targets - Hervé Seitz (MBE)
Mar 9 08:00Mechanisms for achieving high speed and efficiency in biomolecular machines - Jason A. Wagoner, Ken A. Dill (PNAS)
Mar 9 08:00Mitochondrial genomics reveals shared phylogeographic patterns and demographic history among three periodical cicada species groups - Zhenyong Du et al. (MBE)
Mar 8 08:00Resolving phylogenetic relationships for Streptococcus mitis and Streptococcus oralis through core and pan genome analyses - Irina M Velsko, Megan S Perez, Vincent P Richards (GBE)
Mar 8 08:00Genetic variation in Pan species is shaped by demographic history and harbors lineage-specific functions - Sojung Han, Aida M Andrés, Tomas Marques-Bonet, Martin Kuhlwilm (GBE)
Mar 8 08:00A high-quality grapevine downy mildew genome assembly reveals rapidly evolving and lineage-specific putative host adaptation genes - Yann Dussert et al. (GBE)
Mar 8 08:00Large-Scale Comparative Analysis of Codon Models Accounting for Protein and Nucleotide Selection - Iakov I Davydov, Nicolas Salamin, Marc Robinson-Rechavi (MBE)
Mar 6 12:00Distribution and Genetic Diversity of Genes Involved in Quorum Sensing and Prodigiosin Biosynthesis in the Complete Genome Sequences of Serratia marcescens - Ryohei Sakuraoka, Tomohiro Suzuki, Tomohiro Morohoshi (GBE)
Mar 6 12:00The molecular basis of freshwater adaptation in prawns: Insights from comparative transcriptomics of three Macrobrachium species - Md. Lifat Rahi, Peter B Mather, Tariq Ezaz, David A Hurwood (GBE)
Mar 6 12:00Seasonal variation in genome-wide DNA methylation patterns and the onset of seasonal timing of reproduction in great tits - Heidi M Viitaniemi et al. (GBE)
Mar 6 12:00Identifying Lineage-specific Targets of Natural Selection by a Bayesian Analysis of Genomic Polymorphisms and Divergence from Multiple Species - Shilei Zhao et al. (MBE)
Mar 6 12:00Substructured population growth in the Ashkenazi Jews inferred with Approximate Bayesian Computation - Ariella L Gladstein, Michael F Hammer (MBE)
Mar 5 12:00Ribosome provisioning activates a bistable switch coupled to fast exit from stationary phase - P Remigi et al. (MBE)
Mar 5 12:00Repeated phenotypic evolution by different genetic routes in Pseudomonas fluorescens SBW25 - Jenna Gallie et al. (MBE)
Mar 5 12:00Blast fungal genomes show frequent chromosomal changes, gene gains and losses, and effector gene turnover - Luis B Gómez Luciano et al. (MBE)
Mar 5 08:00Evolution of nitric oxide regulation of gut function - Junko Yaguchi, Shunsuke Yaguchi (PNAS)
Mar 4 12:00The draft genome of an octocoral, Dendronephthya gigantea - Yeonsu Jeon et al. (GBE)
Mar 4 12:00Insights into the genomics of clownfish adaptive radiation: genetic basis of the mutualism with sea anemones - Anna Marcionetti et al. (GBE)
Mar 4 08:00Emergence of a chimeric globin pseudogene and increased hemoglobin oxygen affinity underlie the evolution of aquatic specializations in Sirenia - Anthony V Signore et al. (MBE)
Mar 2 08:00Polymorphism-aware species trees with advanced mutation models, bootstrap and rate heterogeneity - Dominik Schrempf, Bui Quang Minh, Arndt von Haeseler, Carolin Kosio (MBE)
Mar 2 08:00Plasticity of Promoter-Core Sequences Allows Bacteria to Compensate for the Loss of a Key Global Regulatory Gene - Otmane Lamrabet et al. (MBE)
Feb 28 08:00Conserved Critical Evolutionary Gene Structures in Orthologs - Miguel A. Fuertes, José R. Rodrigo, Carlos Alonso (JME)
Feb 26 12:00A Machine Learning Method for Detecting Autocorrelation of Evolutionary Rates in Large Phylogenies - Qiqing Tao, Koichiro Tamura, Fabia U Battistuzzi, Sudhir Kumar (MBE)
Feb 26 08:00Evolution of chloroplast retrograde signaling facilitates green plant adaptation to land - Chenchen Zhao et al. (PNAS)
Feb 25 08:00Giant transposons in eukaryotes: Is bigger better? - Irina R Arkhipova, Irina A Yushenova (GBE)
Feb 25 08:00The genome of the fungal pathogen Verticillium dahliae reveals extensive bacterial to fungal gene transfer - Xiaoqian Shi-Kunne et al. (GBE)
Feb 23 08:00Major histocompatibility complex class I diversity limits the repertoire of T cell receptors - Magdalena Migalska, Alvaro Sebastian, Jacek Radwan (PNAS)
Feb 23 08:00Proteomic analysis of histones H2A/H2B and variant Hv1 in Tetrahymena thermophila reveals an ancient network of chaperones - Kanwal Ashraf et al. (MBE)
Feb 22 08:00Acquisition and loss of secondary metabolites shaped the evolutionary path of three emerging phytopathogens of wheat - Elisha Thynne et al. (GBE)
Feb 22 08:00Origin of the aromatic group of cultivated rice (Oryza sativa L.) traced to the Indian subcontinent - Peter Civáň et al. (GBE)
Feb 22 08:00Rapid divergence followed by adaptation to contrasting ecological niches of two closely related columbine species Aquilegia japonica and A. oxysepala - Ming-Rui Li et al. (GBE)
Feb 20 12:00The Chemical Likelihood of Ribonucleotide-α-Amino acid Copolymers as Players for Early Stages of Evolution - Ziwei Liu et al. (JME)
Feb 20 08:00Different ways of doing the same: variations in the two last steps of the purine biosynthetic pathway in prokaryotes - Dennifier Costa Brandão Cruz et al. (GBE)
Feb 20 08:00Trilobite evolutionary rates constrain the duration of the Cambrian explosion - John R. Paterson, Gregory D. Edgecombe, Michael S. Y. Lee (PNAS)
Feb 20 08:00News Feature: Cities serve as testbeds for evolutionary change - Carolyn Beans (PNAS)
Feb 20 08:00An ABC method for whole-genome sequence data: inferring Paleolithic and Neolithic human expansions - Flora Jay, Simon Boitard, Frédéric Austerlitz (MBE)
Feb 20 08:00Evolutionary rate correlation between mitochondrial-encoded and mitochondria-associated nuclear-encoded proteins in insects - Zhichao Yan, Gongyin Ye, John H. Werren (MBE)
Feb 19 20:00Tracing ancient human migrations into Sahul using hepatitis B virus genomes - Lilly K W Yuen et al. (MBE)
Feb 19 12:00Patterns and mechanisms of diminishing returns from beneficial mutations - Xinzhu Wei, Jianzhi Zhang (MBE)
Feb 19 12:00Prebiotic iron originates the peptidyl transfer origin - Shin-Yi Lin, Ying-Chi Wang, Chiaolong Hsiao (MBE)
Feb 19 12:00Neo-functionalisation of mitochondrial proteins and incorporation into signaling networks in plants - Sbatie Lama et al. (MBE)
Feb 19 08:00Inter and intra-specific transcriptional and phenotypic responses of Pseudo-nitzschia under different nutrient conditions - Kimberley A Lema et al. (GBE)