This site is managed by Brian Golding. Note that entries are
retained for only thirty days. Currently only
GBE,
JME,
MBE,
and PNAS (selected articles),
are provided.
| Dec 14 14:03 | Genomic insights into historical adaptation of three key fungal plant pathogens
by Joris A Alkemade and others
(GBE)
|
| Dec 14 14:03 | The chromosome-scale genome assembly of the redlip blenny, Ophioblennius macclurei (Blenniidae)
by Nikita Kulikov and others
(GBE)
|
| Dec 14 14:03 | Highlight: Running Circles Around Genome Architecture
by Shady A Kuster
(GBE)
|
| Dec 13 14:03 | Genomic architecture and evolution of heterostyly: New insights from Cordia subcordata (Boraginaceae)
by Miaomiao Shi and others
(MBE)
|
| Dec 13 14:03 | Widespread turnover of a conserved cis-regulatory code across 589 grass species
by Charles O Hale and others
(MBE)
|
| Dec 13 14:03 | Abundant Recurrent Mitochondrial Mutations and Widespread Mitonuclear Epistasis in Caenorhabditis elegans
by Tuc H M Nguyen and others
(MBE)
|
| Dec 12 17:03 | Phylogenetic Analysis of NEAT1 and MALAT1 Long Non-coding RNAs Highlights Structure-Function Relationships in Paraspeckle Biology
by Ksenia Arkhipova and Micha Drukker
(MBE)
|
| Dec 11 14:03 | Evolution of Insulin, Insulin-like Growth Factor, and Their Cognate Receptors in Vertebrates, Invertebrates, and Viruses
by Martina Chrudinová and others
(MBE)
|
| Dec 11 14:03 | Sponges, ctenophores and the statistical significance of syntenies
by Richard R Copley
(MBE)
|
| Dec 11 14:03 | SMBE Secretary's Report 2025
by Emmanuelle Lerat
(MBE)
|
| Dec 11 14:03 | To Migrate or not to Migrate? Exploring the Genomic Basis of Partial Migratory Behavior in Bats
by Diego M Peralta and others
(GBE)
|
| Dec 9 16:00 | The littler things that run the little things that run the world - Vincent G. , et al. (PNAS)
|
| Dec 9 16:00 | The olfactory bulb endocast as a proxy for mammalian olfaction - Quentin Martinez, et al. (PNAS)
|
| Dec 9 16:00 | Biomechanics of the mandibular middle ear of the cynodont Thrinaxodon and the evolution of mammal hearing - Alec T. , et al. (PNAS)
|
| Dec 9 14:03 | Assessing the impact of whole genome duplication on gene expression and regulation during arachnid development
by Madeleine E Aase-Remedios and others
(GBE)
|
| Dec 8 14:03 | How Life's "Mistakes" Impact Adaptation
by Haoran Cai
(MBE)
|
| Dec 8 14:03 | Ancestral chromosome-level assemblies reveal post-hybridization genome evolution in the New Mexico whiptail lizard (Aspidoscelis neomexicanus)
by David V Ho and others
(GBE)
|
| Dec 7 14:03 | Comparing great apes reveals human-specific ZEB2 roles in neural development
by Jeong-Eun Lee and others
(MBE)
|
| Dec 7 14:03 | Genome skimming illuminates hidden species diversity and Symbiodiniaceae associations in east PacificPocillopora corals
by M T Connelly and others
(GBE)
|
| Dec 7 14:03 | Discovery and Evolutionary Analysis of a Novel Genus of Endogenous Pararetroviruses with Long Terminal Repeats
by Dongying Gao and Lydia Tressel
(GBE)
|
| Dec 6 20:03 | DNA Circles as Vehicles for Genes to Evade Chromosomal Discipline
by Monica Rojas-Triana and others
(GBE)
|
| Dec 6 20:03 | Chromosomal rearrangements and Transposable Elements in locally adapted island Drosophila
by Brandon A Turner and others
(GBE)
|
| Dec 6 20:03 | A Chromosome-level Reference Assembly and Annotation for the White-faced Plover (Charadrius dealbatus) Genome
by Ying Zeng and others
(GBE)
|
| Dec 6 08:00 | Community hydrodynamics created ecological opportunity in Ediacaran shallow marine ecosystems - Susana Gutarra, et al. (PNAS)
|
| Dec 5 14:03 | Life cycle simplifications in aphids drive changes in evolutionary rates and selection regimes
by T Vericel and others
(MBE)
|
| Dec 5 14:03 | Comparative genomics of the Testacea group of Drosophila reveals introgression and variation in chromosome size and structure
by Theresa Erlenbach and others
(GBE)
|
| Dec 4 17:03 | Genome assembly of Gangetic dolphin (Platanista gangetica) reveals signature of regressive evolution
by Surya Prasad Sharma and others
(GBE)
|
| Dec 4 17:03 | Comparative genomics reveals multipartite genomes undergoing loss in the fungal endosymbiotic genusMycetohabitans
by Bhuwan Abbot and others
(GBE)
|
| Dec 4 17:03 | A draft genome assembly of the Antarctic springtail Cryptopygus antarcticus and diversity of glycoside hydrolase genes
by Donggu Jeon and others
(GBE)
|
| Dec 2 20:00 | Genome of venomous caterpillar Doratifera vulnerans reveals recruitment of immune peptides and their adaptation as pain-inducing toxins - Mohaddeseh H. , et al. (PNAS)
|
| Dec 2 20:00 | Short- and long-term costs of reproduction revealed by telomere dynamics in wild greater horseshoe bats - Megan L. , et al. (PNAS)
|
| Dec 2 14:03 | Social stratification without genetic differentiation at the Xisima site in the late Shang Dynasty
by Jiaxin Tang and others
(MBE)
|
| Dec 2 14:03 | Structural mutations set an equilibrium non-coding genome fraction
by Juliette Luiselli and others
(MBE)
|
| Dec 2 14:03 | Unraveling the prevalence and multifaceted roles of accessory peptide deformylases in bacterial adaptation and resistance
by Morgan Lambérioux and others
(MBE)
|
| Dec 2 14:03 | De novo genes: current status and future goals
by Claudio Casola and others
(GBE)
|
| Dec 2 14:03 | Not Just Ne Ne-more: New Applications for SMC from Ecology to Phylogenies
by David Peede and others
(GBE)
|
| Dec 1 14:03 | Ancestral Chaperonins Provide the First Structural Glimpse into Early Multimeric Protein Evolution
by Rita Severino and others
(MBE)
|
| Dec 1 14:03 | Selection estimation from genetic time-series data: Effects of limited sampling and genetic drift
by Qingbei Cheng and others
(MBE)
|
| Dec 1 14:03 | Revisiting the Glucose Kinase Superfamily: From Origins to the Evolution of Metabolism
by Douglas Jardim-Messeder and others
(GBE)
|
| Nov 30 17:03 | Whole-genome duplication reshapes adaptation: autotetraploid Arabidopsis arenosa leverages its high genetic variation to compensate for selection constraints
by Sonia Celestini and others
(MBE)
|
| Nov 29 14:03 | "SLiM 5: Eco-evolutionary simulations across multiple chromosomes and full genomes"
by Benjamin C Haller and others
(MBE)
|
| Nov 29 14:03 | Evolutionary dampening of Wnt signaling may contribute to naturally ascrotal testes in mammals
by Simin Chai and others
(MBE)
|
| Nov 29 14:03 | Orphan and de novo Genes in Fungi and Animals: Identification, Origins and Functions
by Ercan Seçkin and others
(GBE)
|
| Nov 29 14:03 | Haplotype-resolved Chromatin Conformation Data reveals relationship between Transposable Elements and Chromosomal Pairing
by Luke K Genutis and others
(GBE)
|
| Nov 29 14:03 | Species Tree Branch Length Estimation despite Incomplete Lineage Sorting, Duplication, and Loss
by Yasamin Tabatabaee and others
(GBE)
|
| Nov 28 14:03 | quick analysis of sedimentary ancient DNA usingquicksand
by Merlin Szymanski and others
(MBE)
|
| Nov 27 16:00 | Nitrogen-fixing microbes gain genes in diverse types of living environments - Hong-Wei Pi, et al. (PNAS)
|
| Nov 27 16:00 | Unmeasured prior viability selection resolves the paradox of stasis for body size in wild Soay sheep - Elizabeth A. , et al. (PNAS)
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| Nov 27 16:00 | Uncovering heterogeneous intercommunity disease transmission from neutral allele frequency time series - Takashi Okada, et al. (PNAS)
|
| Nov 27 14:03 | Accelerated Mitochondrial Genome Evolution in Parasitic Barnacles Driven by Adaptive and Non-Adaptive Responses
by Jibom Jung and others
(MBE)
|
| Nov 27 14:03 | Evolutionary Flexibility of Ribosome Biogenesis in Bacteria
by Kazuaki Amikura and others
(MBE)
|
| Nov 26 16:00 | Local negative frequency dependence can decrease global coexistence in fragmented populations - Anush Devadhasan, et al. (PNAS)
|
| Nov 26 14:03 | Efficient estimation of nucleotide diversity and divergence using callable loci (and more)
by Cade Mirchandani and others
(MBE)
|
| Nov 26 14:03 | Ancestral sequence reconstruction provides insights into the structural diversification and neofunctionalization of T-superfamily conotoxins inConus
by Samuel S Espino and others
(MBE)
|
| Nov 25 14:03 | Bayesian model-averaging of parametric coalescent models for phylodynamic inference
by Yuan Xu and others
(MBE)
|
| Nov 25 14:03 | Modeling the evolution of ultraconserved elements by indels
by Priscila Biller
(MBE)
|
| Nov 24 14:03 | Chromosomal Curing Drives an Arms Race Between Bacterial Transformation and Prophage
by Min Jung Kwun and others
(MBE)
|
| Nov 23 14:03 | Contrasting genomic trajectories of Bartonellaceae symbionts of planthoppers
by Mingjie Ma and others
(GBE)
|
| Nov 22 14:03 | SAI: A Python Package for Statistics for Adaptive Introgression
by Xin Huang and others
(MBE)
|
| Nov 22 12:00 | Triangle weaver spiders construct spring-loaded webs using a novel set of genes for exceptionally proline-rich silk - Steven Casey, et al. (PNAS)
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| Nov 22 12:00 | Conservation of glial density and cell-type ratios within a brain region across mammals - Antonio Pinto-, et al. (PNAS)
|
| Nov 21 14:03 | Robust and Efficient Confidence Limits for Phylogenomic Inference of Organismal Relationships
by Sudip Sharma and Sudhir Kumar
(MBE)
|
| Nov 21 14:03 | Signals of Ancestry-Specific Selection in Gentle Africanized Honey Bees
by Maximilian Genetti and Russell Corbett-Detig
(GBE)
|
| Nov 20 14:03 | Human Population Genetic History and Evolutionary Dynamics on the Eastern Tibetan Plateau
by Guanglin He and others
(MBE)
|
| Nov 18 14:03 | Neo-sex chromosomes track the mitochondrial phylogeny and exhibit an extensive added stratum of recombination suppression in honeyeaters (Aves: Meliphagidae)
by Sophia C M Orzechowski and others
(GBE)
|
| Nov 18 08:00 | The ghost of Bombus past: Investigating the mystery of an extinct bumblebee - Hadil Elsayed, et al. (PNAS)
|
| Nov 18 08:00 | Morphological and genomic responses to hurricanes arise and persist during a biological invasion - Jason J. , et al. (PNAS)
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| Nov 18 08:00 | High-resolution single-cell analyses reveal evolutionary constraints and evolvability of sexual circuits in Drosophila - Justin T. , et al. (PNAS)
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| Nov 17 14:03 | Pan-angiosperm analysis of the CLE signaling peptide gene family unveils paths, patterns, and predictions of paralog diversification
by Iacopo Gentile and others
(MBE)
|
| Nov 17 11:03 | Tandem duplication of serpin genes yields functional variation and snake venom inhibitors
by Meilyn S Ward and others
(MBE)
|
| Nov 17 11:03 | De Novo Gene Emergence: Summary, Classification, and Challenges of Current Methods
by Anna Grandchamp and others
(GBE)
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| Nov 17 11:03 | Natural selection in Transcription Factor (TF)-DNA interaction motifs - A comparative and population genomics perspective
by Manas Joshi and others
(GBE)
|
| Nov 17 11:03 | Acquisition of Spacers from Foreign Prokaryotic Genomes by CRISPR-Cas Systems in Natural Environments
by Katharina Sures and others
(GBE)
|
| Nov 17 11:03 | Molecular and functional divergence of zebrafish Sox paralogues controlling endoderm formation and left-right patterning
by Simaran Johal and others
(GBE)
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| Nov 17 11:03 | Loss of conserved noncoding elements likely shaped the evolution of regressed phenotypes in cavefish
by Mohan Lal and others
(GBE)
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| Nov 17 11:03 | The Genomic Kaleidoscope: On the Hidden Dimensions of Within-Species Genomic Diversity
by Marina Brasó-Vives and others
(GBE)
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| Nov 17 11:03 | Diversification of the staphylococcal cassette chromosome through distinct mechanisms of horizontal transfer
by Héloïse Muller and Cheryl P Andam
(GBE)
|