Subject: Briefings in Bioinformatics Table of Contents for January 2018 ------=_Part_573225180.1516467692298 Content-Type: text/plain;charset=UTF-8 Oxford Academic [[HeaderAdvertisingToken]] https://silverchair.emailcampaigns.net/media/50/509735/OUP/oxford_logo.jpg?g72331686458 (http://click.skem1.com/click/m5qif-dbif90-66q6ox37/) [[BannerToken]] [[AlertTitleToken]] [[SelfServeTextToken]] [[FirstAdvertisingToken]] [[TOCMainToken]] Unsubscribe (http://click.skem1.com/form?m5qif--ply5-66q6ox36&sl=tq&t=5)Manage email alerts (http://click.skem1.com/click/m5qif-dbif91-66q6ox38/) Written requests to unsubscribe can be sent to: Journals Marketing, Oxford University Press, Great Clarendon Street, Oxford, OX2 6DP, UK. The content of this email is protected by copyright. https://silverchair.emailcampaigns.net/media/50/509735/OUP/oxforde_university.jpg?g72331733632 (http://click.skem1.com/click/m5qif-dbif92-66q6ox39/) [[BottomAdvertisingToken]] This email is intended for bionet@evol.mcmaster.ca. ------=_Part_573225180.1516467692298 Content-Type: text/html;charset=UTF-8 Oxford Academic
 
 
 
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Briefings in Bioinformatics  
Volume 19 Issue 1
 
January 2018
 
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Papers
 
 
 
A systematic evaluation of normalization methods in quantitative label-free proteomics border= 
 
Tommi Välikangas; Tomi Suomi; Laura L Elo
 
 
Inter-kingdom prediction certainty evaluation of protein subcellular localization tools: microbial pathogenesis approach for deciphering host microbe interaction 
 
Abdul Arif Khan; Zakir Khan ; Mohd Abul Kalam; Azmat Ali Khan
 
 
The present and future of de novo whole-genome assembly 
 
Jang-il Sohn; Jin-Wu Nam
 
 
A bioimage informatics platform for high-throughput embryo phenotyping border= 
 
James M Brown; Neil R Horner; Thomas N Lawson; Tanja Fiegel; Simon Greenaway ...
 
 
Combinatorial epigenetic regulation of non-coding RNAs has profound effects on oncogenic pathways in breast cancer subtypes 
 
Juan Xu; ZiShan Wang; Shengli Li; Juan Chen; Jinwen Zhang ...
 
 
 
 
Synthetic data sets for the identification of key ingredients for RNA-seq differential analysis 
 
Guillem Rigaill; Sandrine Balzergue; Véronique Brunaud; Eddy Blondet; Andrea Rau ...
 
 
Notions of similarity for systems biology models border= 
 
Ron Henkel ; Robert Hoehndorf; Tim Kacprowski; Christian Knüpfer; Wolfram Liebermeister ...
 
 
The framework for population epigenetic study 
 
Linna Zhao; Di Liu; Jing Xu; Zhaoyang Wang ; Yang Chen ...
 
 
Genome-wide DNA methylation analysis identifies candidate epigenetic markers and drivers of hepatocellular carcinoma 
 
Yongchang Zheng ; Qianqian Huang; Zijian Ding; Tingting Liu; Chenghai Xue ...
 
 
An empirical likelihood ratio test robust to individual heterogeneity for differential expression analysis of RNA-seq  
 
Maoqi Xu; Liang Chen
 
 
 
 
Computational pan-genomics: status, promises and challenges border= 
 
The Computational Pan-Genomics Consortium ; Tobias Marschall; Manja Marz ; Thomas Abeel; Louis Dijkstra ...
 
 
Transferring entropy to the realm of GxG interactions border= 
 
Paola G Ferrario; Inke R König
 
 
Comprehensive assessment and performance improvement of effector protein predictors for bacterial secretion systems III, IV and VI 
 
Yi An; Jiawei Wang; Chen Li; André Leier ; Tatiana Marquez-Lago ...
 
 
A graphical model approach visualizes regulatory relationships between genome-wide transcription factor binding profiles border= 
 
Felicia S L Ng; David Ruau; Lorenz Wernisch; Berthold Göttgens
 
 
A review of validation strategies for computational drug repositioning border= 
 
Adam S Brown; Chirag J Patel
 
 
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