Subject: PLOS Computational Biology Volume 13(3) March 2017 Content-Type: text/html; charset="utf-8" Content-Transfer-Encoding: 8bit

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New Articles in PLOS Computational Biology

PUBLISHED: March 01, 2017 to March 31, 2017

Editorials

PLOS Computational Biology 2016 Reviewer and Editorial Board Thank You

Ten simple rules for forming a scientific professional society

Ten simple rules for short and swift presentations

Ten simple rules for responsible big data research

Research Articles

Multiregional integration in the brain during resting-state fMRI activity

A magnesium-induced triplex pre-organizes the SAM-II riboswitch

Fidelity of the representation of value in decision-making

Novel non-invasive algorithm to identify the origins of re-entry and ectopic foci in the atria from 64-lead ECGs: A computational study

Scalable Design of Paired CRISPR Guide RNAs for Genomic Deletion

Mechanisms of fast and stringent search in homologous pairing of double-stranded DNA

Managing uncertainty in metabolic network structure and improving predictions using EnsembleFBA

Biomarkers are used to predict quantitative metabolite concentration profiles in human red blood cells

Inferring epidemiological parameters from phylogenies using regression-ABC: A comparative study

Feedback between motion and sensation provides nonlinear boost in run-and-tumble navigation

Bistable front dynamics in a contractile medium: Travelling wave fronts and cortical advection define stable zones of RhoA signaling at epithelial adherens junctions

BIDS apps: Improving ease of use, accessibility, and reproducibility of neuroimaging data analysis methods

A model for brain life history evolution

A human judgment approach to epidemiological forecasting

Modelling T cell proliferation: Dynamics heterogeneity depending on cell differentiation, age, and genetic background

Patient-specific modeling of individual sickle cell behavior under transient hypoxia

Stimulus-specific adaptation in a recurrent network model of primary auditory cortex

Dynamics robustness of cascading systems

Parameter estimation for multistage clonal expansion models from cancer incidence data: A practical identifiability analysis

Fast online deconvolution of calcium imaging data

A thermodynamically consistent model of the post-translational Kai circadian clock

Classification and adaptive behavior prediction of children with autism spectrum disorder based upon multivariate data analysis of markers of oxidative stress and DNA methylation

Fragility of foot process morphology in kidney podocytes arises from chaotic spatial propagation of cytoskeletal instability

Reconstruction and signal propagation analysis of the Syk signaling network in breast cancer cells

A general model for metabolic scaling in self-similar asymmetric networks

A computational analysis of in vivo VEGFR activation by multiple co-expressed ligands

Navigating in foldonia: Using accelerated molecular dynamics to explore stability, unfolding and self-healing of the beta -solenoid structure formed by a silk-like polypeptide

Structurally detailed coarse-grained model for Sec-facilitated co-translational protein translocation and membrane integration

Bioenergetics-based modeling of Plasmodium falciparum metabolism reveals its essential genes, nutritional requirements, and thermodynamic bottlenecks

Network perturbation by recurrent regulatory variants in cancer

PBMDA: A novel and effective path-based computational model for miRNA-disease association prediction

Geometry can provide long-range mechanical guidance for embryogenesis

Systematic identification of phosphorylation-mediated protein interaction switches

Phylodynamics on local sexual contact networks

High GC content causes orphan proteins to be intrinsically disordered

A critical analysis of computational protein design with sparse residue interaction graphs

Dysfunctions of the basal ganglia-cerebellar-thalamo-cortical system produce motor tics in Tourette syndrome

Migration of small ligands in globins: Xe diffusion in truncated hemoglobin N

Beware batch culture: Seasonality and niche construction predicted to favor bacterial adaptive diversification

Learning about and from others' prudence, impatience or laziness: The computational bases of attitude alignment

Interrogating the topological robustness of gene regulatory circuits by randomization

ARACHNE: A neural-neuroglial network builder with remotely controlled parallel computing

The preferred nucleotide contexts of the AID/APOBEC cytidine deaminases have differential effects when mutating retrotransposon and virus sequences compared to host genes

Effects of contact structure on the transient evolution of HIV virulence

Corrections

Correction: Inference of Quantitative Models of Bacterial Promoters from Time-Series Reporter Gene Data

Correction: A Molecular Clock Infers Heterogeneous Tissue Age Among Patients with Barrett's Esophagus

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