Subject: PLOS Computational Biology Volume 14(1) January 2018 Content-Type: text/html; charset="utf-8" Content-Transfer-Encoding: 8bit

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New Articles in PLOS Computational Biology

PUBLISHED: January 01, 2018 to January 31, 2018

Editorials

Ten simple rules for biologists learning to program

Ten simple rules for drawing scientific comics

Education

Assessing an effective undergraduate module teaching applied bioinformatics to biology students

The ISCB Student Council Internship Program: Expanding computational biology capacity worldwide

Research Articles

Mathematical modeling identifies optimum lapatinib dosing schedules for the treatment of glioblastoma patients

Probing instructions for expression regulation in gene nucleotide compositions

Integration of pan-cancer transcriptomics with RPPA proteomics reveals mechanisms of epithelial-mesenchymal transition

A systematic atlas of chaperome deregulation topologies across the human cancer landscape

Improving pairwise comparison of protein sequences with domain co-occurrence

Model-driven discovery of long-chain fatty acid metabolic reprogramming in heterogeneous prostate cancer cells

A neural network model for the orbitofrontal cortex and task space acquisition during reinforcement learning

Functional interrogation of Plasmodium genus metabolism identifies species- and stage-specific differences in nutrient essentiality and drug targeting

Representability of algebraic topology for biomolecules in machine learning based scoring and virtual screening

Robust and efficient coding with grid cells

Cardinal features of involuntary force variability can arise from the closed-loop control of viscoelastic afferented muscles

Bowhead: Bayesian modelling of cell velocity during concerted cell migration

Modeling the genetic relatedness of Plasmodium falciparum parasites following meiotic recombination and cotransmission

Bayesian inference of phylogenetic networks from bi-allelic genetic markers

Identifying human diamine sensors for death related putrescine and cadaverine molecules

Disentangling and modeling interactions in fish with burst-and-coast swimming reveal distinct alignment and attraction behaviors

A direct interaction of cholesterol with the dopamine transporter prevents its out-to-inward transition

Modeling the assembly order of multimeric heteroprotein complexes

A model for cooperative gating of L-type Ca2+ channels and its effects on cardiac alternans dynamics

The E2.65A mutation disrupts dynamic binding poses of SB269652 at the dopamine D2 and D3 receptors

A dynamical systems approach for estimating phase interactions between rhythms of different frequencies from experimental data

Clustering gene expression time series data using an infinite Gaussian process mixture model

HaSAPPy: A tool for candidate identification in pooled forward genetic screens of haploid mammalian cells

Interactions between species introduce spurious associations in microbiome studies

Interrupting behaviour: Minimizing decision costs via temporal commitment and low-level interrupts

Inferring cell state by quantitative motility analysis reveals a dynamic state system and broken detailed balance

A theory of how active behavior stabilises neural activity: Neural gain modulation by closed-loop environmental feedback

Mechanical feedback coordinates cell wall expansion and assembly in yeast mating morphogenesis

A mathematical model for IL-6-mediated, stem cell driven tumor growth and targeted treatment

Static length changes of cochlear outer hair cells can tune low-frequency hearing

What drives the perceptual change resulting from speech motor adaptation? Evaluation of hypotheses in a Bayesian modeling framework

Modeling visual-based pitch, lift and speed control strategies in hoverflies

Sequence determinants of protein phase behavior from a coarse-grained model

Predicting peak spectral sensitivities of vertebrate cone visual pigments using atomistic molecular simulations

The role of spatial heterogeneity in the evolution of local and global infections of viruses

MUMmer4: A fast and versatile genome alignment system

Reactome graph database: Efficient access to complex pathway data

Identification of allosteric inhibitors of the ecto-5'-nucleotidase (CD73) targeting the dimer interface

The extent of ribosome queuing in budding yeast

Biophysical network modeling of the dLGN circuit: Effects of cortical feedback on spatial response properties of relay cells

SozRank: A new approach for localizing the epileptic seizure onset zone

Metabolic plasticity in synthetic lethal mutants: Viability at higher cost

Predicting pathogenicity behavior in Escherichia coli population through a state dependent model and TRS profiling

GSimp: A Gibbs sampler based left-censored missing value imputation approach for metabolomics studies

Correction

Correction: Lack of Ecological and Life History Context Can Create the Illusion of Social Interactions in Dictyostelium discoideum

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