Bacterial genomes develop new mechanisms to tide them over the imposing conditions that they encounter during the course of their evolution. Acquisition of new genes by lateral gene transfer may be one of the dominant ways of adaptation in bacterial genome evolution. Lateral gene transfer provides the bacterial genome with a new set of genes that help it to explore and adapt to new ecological niches. A maximum likelihood analysis was done on the five sequenced corynebacterial genomes to model the rates of gene insertions/deletions at various depths of the phylogeny. The study shows that the inferred rates of gene movement are more common on the external branches of the phylogeny and decrease as the phylogenetic depth increases. The newly acquired genes are under relaxed selection and evolve faster than their older counterparts. The five Corynebacterial genomes sequenced to date have evolved by acquiring between 8 - 14% of their genomes by LGT and an analysis of some of the functionally characterised LGTs has indicated that they may have a possible adaptive role. The entire list of specific genes for each of the sequenced corynebacterial species is listed below. |
clpB2 | cobH | cobIJ | cobK | cobN | dcuB | dirA | glpF | hypC | hypD |
hypE | lldP | metE | nadB | sdaC | tnpA2 | DIP0013 | DIP0019 | DIP0020 | DIP0032 |
DIP0036 | DIP0037 | DIP0038 | DIP0047 | DIP0075 | DIP0086 | DIP0103 | DIP0112 | DIP0114 | DIP0119 |
DIP0125 | DIP0180 | DIP0181 | DIP0182 | DIP0183 | DIP0187 | DIP0203 | DIP0204 | DIP0205 | DIP0207 |
DIP0210 | DIP0212 | DIP0216 | DIP0225 | DIP0242 | DIP0248 | DIP0267 | DIP0275 | DIP0284 | DIP0285 |
DIP0287 | DIP0316 | DIP0323 | DIP0324 | DIP0325 | DIP0328 | DIP0329 | DIP0330 | DIP0331 | DIP0336 |
DIP0337 | DIP0348 | DIP0353 | DIP0377 | DIP0379 | DIP0443 | DIP0449 | DIP0462 | DIP0463 | DIP0464 |
DIP0465 | DIP0530 | DIP0533 | DIP0534 | DIP0535 | DIP0543 | DIP0586 | DIP0587 | DIP0588 | DIP0601 |
DIP0647 | DIP0659 | DIP0669 | DIP0670 | DIP0671 | DIP0672 | DIP0673 | DIP0674 | DIP0675 | DIP0676 |
DIP0677 | DIP0678 | DIP0690 | DIP0703 | DIP0704 | DIP0752 | DIP0753 | DIP0754 | DIP0756 | DIP0757 |
DIP0758 | DIP0761 | DIP0794 | DIP0795 | DIP0796 | DIP0800 | DIP0802 | DIP0806 | DIP0807 | DIP0822 |
DIP0828 | DIP0842 | DIP0902 | DIP0946 | DIP1016 | DIP1029 | DIP1030 | DIP1031 | DIP1032 | DIP1086 |
DIP1117 | DIP1119 | DIP1140 | DIP1149 | DIP1150 | DIP1231 | DIP1381 | DIP1382 | DIP1419 | DIP1487 |
DIP1488 | DIP1489 | DIP1609 | DIP1646 | DIP1651 | DIP1652 | DIP1655 | DIP1656 | DIP1659 | DIP1662 |
DIP1688 | DIP1692 | DIP1715 | DIP1751 | DIP1754 | DIP1756 | DIP1758 | DIP1799 | DIP1817 | DIP1823 |
DIP1824 | DIP1825 | DIP1828 | DIP1831 | DIP1832 | DIP1834 | DIP1836 | DIP1840 | DIP1879 | DIP1893 |
DIP1896 | DIP1934 | DIP1937 | DIP1947 | DIP1949 | DIP1956 | DIP1981 | DIP1984 | DIP1985 | DIP1986 |
DIP2033 | DIP2044 | DIP2060 | DIP2062 | DIP2065 | DIP2066 | DIP2069 | DIP2074 | DIP2079 | DIP2080 |
DIP2081 | DIP2109 | DIP2116 | DIP2121 | DIP2130 | DIP2132 | DIP2135 | DIP2139 | DIP2140 | DIP2143 |
DIP2153 | DIP2154 | DIP2161 | DIP2192 | DIP2208 | DIP2212 | DIP2213 | DIP2214 | DIP2215 | DIP2218 |
DIP2224 | DIP2227 | DIP2244 | DIP2249 | DIP2256 | DIP2262 | DIP2308 | DIP2311 | DIP2313 | DIP2317 |
DIP2330 | DIP2334 | DIP2335 | DIP2336 | DIP2338 |
Gene | Putative Donor | Function based on Annotation |
DIP0036 | Rhodospirillum rubrum | Hypothetical protein |
DIP0037 | Nitrobacter winogradskyi | Hypothetical protein |
DIP0038 | Nitroabcter winogradskyi | Hypothetical protein |
DIP0112 | Lactobacillus casei | Hypothetical protein |
DIP0119 | Chlorobium tepidum | Hypothetical protein |
DIP0125 | Pseudomonas fluorescens | Hypothetical protein |
DIP0225 | Bradyrhizobium sp. | Putative secreted polysaccharide deacetylase |
DIP0284 | Pseudomonas syringae | Putative ABC-transport system iron-binding secreted protein |
DIP0287 | Bacteroides/Chlorobium | Two-component sensor protein |
DIP0323 | Erwinia carotovora | Putative ABC transport system membrane protein |
DIP0586 | Thiobacillus denitrificans | Putative siderophore biosynthesis related protein |
DIP0647 | Dechloromonas aromatica | Hypothetical protein |
DIP0669 | Methylococcus capsulatus | Putative hydrogenase maturation protein |
DIP0672 | Geobacter sulfurreducens | Putative uptake hydrogenase small subunit |
DIP0674 | Campylobacter jejuni | Putative Ni/Fe-hydrogenase B-type cytochrome subunit |
DIP0753 | Staphylococcus aureus | Putative lantibiotic modifying enzyme |
DIP0795 | Campylobacter sp. | Hypothetical protein |
DIP0796 | Gloeobacter violaceus | Hypothetical protein |
DIP0806 | Nitrosococcus oceani | Hypothetical protein |
DIP0807 | Magnetococcus magnetotacticum | Hypothetical protein |
DIP0902 | Streptococcus suis | Putative hydrolase |
DIP1030 | Desulfovibrio vulgaris | Hypothetical protein |
DIP1381 | Pelobacter carbonolicus | Putative biotin synthesis related protein |
DIP1656 | chlorobium/helicobacter | Hypothetical protein |
DIP1756 | Lactobacillus sp. | Putative DNA methyltransferase |
DIP1834 | Bacillus cereus | Hypothetical protein |
DIP1836 | Eukaryote Repeats | Collagen-like repeat protein |
DIP1893 | Streptococcus agalactiae | Hypothetical protein |
DIP1947 | Pseudomonas aeruginosa | Integrase |
DIP1949 | Proteobacteria | Putative acetyltransferase |
DIP1956 | Actinobacillus pleuropneumoniae | Hypothetical protein |
DIP1984 | Clostridium tetani | Hypothetical protein |
DIP2033 | Xanthomonas sp. | Putative transposase |
DIP2060 | Campylobacter lari | Putative membrane protein |
DIP2079 | Proteobacteria | Putative oxidoreductase |
DIP2109 | Desulfitobacterium hafniense | Putative integral membrane protein |
DIP2121 | Dechloromonas aromatica | Hypothetical protein |
DIP2135 | Neisseria meningitidis | Putative zinc-binding alcohol dehydrogenase |
DIP2244 | Chlorobium chlorochromati | Hypothetical protein |
DIP2249 | Anaeromyxobacter dehalogenes | Putative nitric-oxide reductase |
DIP2308 | Xanthomonas campestris | Conserved Hypothetical protein (possible plasmid origin) |
DIP2311 | Chlorobium sp. | Hypothetical protein |
DIP2313 | Sinorhizobium meliloti | Putative type I restriction/modification system DNA specificity protein |
DIP2336 | Exiguobacterium sp. | Hypothetical protein |
glpF | Fusobacterium nucleatum | Glycerol uptake facilitator protein |
hypD | Thiomicrospora denitrificans | Hydrogenase isoenzymes formation protein |
sdaC | Firmicutes | Serine transporter |
tnpA2 | Proteobacteria | Transposase |
CE0024 | CE0025 | CE0027 | CE0043 > | CE0049 | CE0058CE0059 | CE0060 | CE0063 | CE0069 | |
CE0071 | CE0072 | CE0083 | CE0085 | CE0098 | CE0111 | CE0114 | CE0118 | CE0122 | CE0134 |
CE0155 | CE0156 | CE0157 | CE0176 | CE0181 | CE0206 | CE0217 | CE0229 | CE0230 | CE0231 |
CE0237 | CE0249 | CE0252 | CE0257 | CE0258 | CE0259 | CE0260 | CE0262 | CE0266 | CE0295 |
CE0303 | CE0308 | CE0314 | CE0320 | CE0321 | CE0326 | CE0329 | CE0340 | CE0349 | CE0350 |
CE0351 | CE0355 | CE0361 | CE0362 | CE0367 | CE0368 | CE0369 | CE0378 | CE0379 | CE0381 |
CE0403 | CE0433 | CE0444 | CE0449 | CE0451 | CE0452 | CE0488 | CE0506 | CE0510 | CE0519 |
CE0526 | CE0547 | CE0604 | CE0665 | CE0668 | CE0676 | CE0710 | CE0711 | CE0713 | CE0714 |
CE0715 | CE0722 | CE0724 | CE0765 | CE0816 | CE0818 | CE0820 | CE0827 | CE0829 | CE0841 |
CE0850 | CE0865 | CE0866 | CE0869 | CE0870 | CE0882 | CE0914 | CE0928 | CE1010 | CE1024 |
CE1027 | CE1028 | CE1032 | CE1072 | CE1073 | CE1074 | CE1086 | CE1087 | CE1088 | CE1089 |
CE1094 | CE1097 | CE1098 | CE1100 | CE1103 | CE1108 | CE1110 | CE1111 | CE1119 | CE1126 |
CE1130 | CE1151 | CE1187 | CE1188 | CE1192 | CE1200 | CE1201 | CE1202 | CE1203 | CE1204 |
CE1205 | CE1210 | CE1216 | CE1221 | CE1222 | CE1227 | CE1229 | CE1233 | CE1237 | CE1238 |
CE1243 | CE1244 | CE1245 | CE1246 | CE1247 | CE1248 | CE1256 | CE1257 | CE1271 | CE1272 |
CE1280 | CE1281 | CE1282 | CE1283 | CE1286 | CE1339 | CE1340 | CE1341 | CE1354 | CE1355 |
CE1371 | CE1381 | CE1394 | CE1395 | CE1398 | CE1399 | CE1402 | CE1417 | CE1450 | CE1460 |
CE1462 | CE1468 | CE1473 | CE1474 | CE1475 | CE1476 | CE1478 | CE1480 | CE1493 | CE1505 |
CE1508 | CE1512 | CE1513 | CE1535 | CE1568 | CE1569 | CE1577 | CE1578 | CE1579 | CE1672 |
CE1673 | CE1674 | CE1676 | CE1742 | CE1756 | CE1760 | CE1762 | CE1877 | CE1928 | CE1931 |
CE1935 | CE1941 | CE1943 | CE1948 | CE1949 | CE1998 | CE2034 | CE2044 | CE2105 | CE2106 |
CE2111 | CE2160 | CE2166 | CE2198 | CE2214 | CE2216 | CE2219 | CE2275 | CE2279 | CE2321 |
CE2326 | CE2341 | CE2356 | CE2360 | CE2362 | CE2363 | CE2367 | CE2377 | CE2379 | CE2380 |
CE2381 | CE2391 | CE2393 | CE2395 | CE2396 | CE2407 | CE2450 | CE2459 | CE2463 | CE2491 |
CE2505 | CE2517 | CE2551 | CE2562 | CE2563 | CE2609 | CE2618 | CE2633 | CE2634 | CE2653 |
CE2669 | CE2674 | CE2679 | CE2686 | CE2694 | CE2740 | CE2743 | CE2744 | CE2747 | CE2748 |
CE2760 | CE2771 | CE2777 | CE2781 | CE2800 | CE2802 | CE2852 | CE2855 | CE2876 | CE2881 |
CE2882 | CE2884 | CE2885 | CE2887 | CE2888 | CE2889 | CE2890 | CE2891 | CE2893 | CE2899 |
CE2907 | CE2937 | CE0008 |
Gene | Putative Donor | Function based on Annotation |
CE0008 | Acinetobacter sp. | Hypothetical protein |
CE0024 | Francisella talurensis | Hypothetical protein |
CE0063 | Colwellia psychrerythreae | Hypothetical protein |
CE0069 | Pseudomona syringae | Putative ribosomal protein S6 modification protein |
CE0098 | Chromohalobacter salexigens | Hypothetical protein |
CE0111 | Methanosarcina mazei | Hypothetical protein |
CE0217 | Firmicutes | Hypothetical protein |
CE0229 | Alkalilimnicola ehrlichei | Hypothetical protein |
CE0258 | Rhodopirellula and Halobacterium | Putative restriction enzyme subunit S |
CE0266 | Chlorobium/Nitrosomonas | Hypothetical protein |
CE0320 | Rhodopseudomonas | Hypothetical protein |
CE0326 | Fungi | Putative 3-oxoacid CoA-transferase |
CE0329 | Bacillus sp. | Putative beta-glucosidase |
CE0350 | Proteobacteria | Hypothetical protein |
CE0351 | Pelodictyon sp. | Hypothetical protein |
CE0355 | Yersinia pestis | Hypothetical protein |
CE0362 | Proteobacteria | Putative UDP-galactose 4-epimerase |
CE0378 | Streptococcus thermophilus | Hypothetical protein |
CE0379 | Proteobacteria | Hypothetical protein |
CE0381 | Desulfotalea psychrophila | Putative lipopolysaccharide biosynthesis protein |
CE0451 | Pelobacter carbinolicus | Hypothetical protein |
CE0452 | Nostoc sp. | Hypothetical protein |
CE0488 | Azotobacter vinelandii | Hypothetical protein |
CE0722 | Paracoccus denitrificans | Putative 3-hydroxyacyl-CoA dehydrogenase |
CE0724 | Ralstonia/Xanthomonas sp. | Hypothetical protein |
CE0866 | Bacillus licheniformis | Hypothetical protein |
CE0928 | Rhodobacter sp. | Hypothetical protein |
CE1072 | Burkholderia fungorum | Putative transcription regulator |
CE1073 | Bordetella parapertussis | Putative L-carnitine dehydratase |
CE1086 | Fusobacterium nucleatum | Hypothetical protein |
CE1088 | Firmicutes | Hypothetical protein |
CE1108 | Desulfitobacterium hafniense | Hypothetical protein |
CE1111 | Magnetospirillum magnetotacticum | Putative 3-alpha-hydroxysteroid dehydrogenase |
CE1187 | Firmicutes | Hypothetical protein |
CE1341 | Solibacter ulistates | Putative nisin resistance protein |
CE1394 | Alkalilimnicola ehrlichei | Hypothetical protein |
CE1398 | Alkalilimnicola ehrlichei | Hypothetical protein |
CE1417 | Dechloromonas aromatica | Hypothetical protein |
CE1450 | Psychrobacter arcticus | Hypothetical protein |
CE1478 | Magnetococcus sp. | Hypothetical protein |
CE1480 | Archaea | Hypothetical protein |
CE1493 | Enterobacter sp. | Hypothetical protein |
CE1578 | Exiguobacterium sp. | Hypothetical protein |
CE1742 | Aeropyrum pernix | Hypothetical protein |
CE1928 | Sinorhizobium meliloti | Hypothetical protein |
CE1931 | Rubrobacter sp. | Putative periplasmic serine protease |
CE1943 | Rhodopirellula baltica | Hypothetical protein |
CE2367 | Bdellovibrio bacteriovorus | Hypothetical protein |
CE2396 | Firmicutes | Hypothetical protein |
CE2450 | Erythrobacter sp. | Hypothetical protein |
CE2463 | Azoarcus sp. | Hypothetical protein |
CE2674 | Oceanobacillus iheyensis | Hypothetical protein |
CE2743 | Nitrosococcus oceani | Hypothetical protein |
CE2744 | Xylella fatidiosa | Hypothetical protein |
CE2747 | Nitrosococcus oceani | Hypothetical protein |
CE2748 | Xylella fatidiosa | Hypothetical protein |
CE2891 | Desulfovibrio desulfuricans | Hypothetical protein |
CE2899 | Desulfovibrio desulfuricans | Hypothetical protein |
bglY | cg0031 | cg0175 | cg0231 | cg0232 | cg0255 | cg0283 | cg0308 | cg0311 | cg0372 |
cg0380 | cg0440 | cg0449 | cg0606 | cg0785 | cg0801 | cg0836 | cg0851 | cg0903 | cg0904 |
cg0907 | cg0909 | cg1013 | cg1025 | cg1028 | cg1057 | cg1085 | cg1087 | cg1092 | cg1095 |
cg1172 | cg1180 | cg1189 | cg1241 | cg1542 | cg1549 | cg1751 | cg1770 | cg1808 | cg1860 |
cg1894 | cg1900 | cg1906 | cg1914 | cg1916 | cg1918 | cg1919 | cg1924 | cg1925 | cg1972 |
cg1985 | cg1986 | cg2004 | cg2025 | cg2027 | cg2049 | cg2053 | cg2073 | cg2325 | cg2351 |
cg2379 | cg2439 | cg2454 | cg2462 | cg2465 | cg2480 | cg2481 | cg2548 | cg2593 | cg2665 |
cg2785 | cg3108 | cg3111 | cg3120 | cg3125 | cg3228 | cg3229 | cg3230 | cg3257 | cg3268 |
cg3269 | cg3270 | cg3273 | cg3309 | cg3326 | cg3377 | cg3388 | cg3401 | cg3416 | cg3433 |
cg4000 | cg4005 | cg4006 | NCgl0002 | NCgl0015 | NCgl0017 | NCgl0026 | NCgl0039 | NCgl0049 | NCgl0050 |
NCgl0057 | NCgl0058 | NCgl0059 | NCgl0060 | NCgl0062 | NCgl0082 | NCgl0093 | NCgl0094 | NCgl0096 | NCgl0097 |
NCgl0105 | NCgl0107 | NCgl0109 | NCgl0110 | NCgl0111 | NCgl0115 | NCgl0124 | NCgl0129 | NCgl0132 | NCgl0134 |
NCgl0139 | NCgl0150 | NCgl0152 | NCgl0157 | NCgl0158 | NCgl0159 | NCgl0161 | NCgl0163 | NCgl0164 | NCgl0165 |
NCgl0167 | NCgl0168 | NCgl0169 | NCgl0171 | NCgl0172 | NCgl0173 | NCgl0175 | NCgl0176 | NCgl0177 | NCgl0178 |
NCgl0204 | NCgl0220 | NCgl0221 | NCgl0223 | NCgl0230 | NCgl0234 | NCgl0235 | NCgl0237 | NCgl0238 | NCgl0239 |
NCgl0253 | NCgl0256 | NCgl0257 | NCgl0259 | NCgl0260 | NCgl0266 | NCgl0274 | NCgl0280 | NCgl0285 | NCgl0287 |
NCgl0289 | NCgl0292 | NCgl0313 | NCgl0314 | NCgl0315 | NCgl0321 | NCgl0326 | NCgl0329 | NCgl0348 | NCgl0349 |
NCgl0351 | NCgl0353 | NCgl0354 | NCgl0355 | NCgl0356 | NCgl0357 | NCgl0363 | NCgl0364 | NCgl0365 | NCgl0374 |
NCgl0392 | NCgl0393 | NCgl0399 | NCgl0412 | NCgl0414 | NCgl0416 | NCgl0430 | NCgl0443 | NCgl0452 | NCgl0453 |
NCgl0461 | NCgl0462 | NCgl0478 | NCgl0481 | NCgl0484 | NCgl0498 | NCgl0519 | NCgl0526 | NCgl0544 | NCgl0545 |
NCgl0565 | NCgl0572 | NCgl0609 | NCgl0615 | NCgl0621 | NCgl0634 | NCgl0643 | NCgl0655 | NCgl0656 | NCgl0660 |
NCgl0661 | NCgl0683 | NCgl0699 | NCgl0717 | NCgl0718 | NCgl0728 | NCgl0731 | NCgl0734 | NCgl0736 | NCgl0749 |
NCgl0750 | NCgl0758 | NCgl0792 | NCgl0793 | NCgl0794 | NCgl0796 | NCgl0797 | NCgl0798 | NCgl0806 | NCgl0837 |
NCgl0838 | NCgl0840 | NCgl0896 | NCgl0898 | NCgl0900 | NCgl0901 | NCgl0902 | NCgl0903 | NCgl0907 | NCgl0940 |
NCgl0950 | NCgl0956 | NCgl0957 | NCgl0958 | NCgl0979 | NCgl0980 | NCgl0984 | NCgl0992 | NCgl0994 | NCgl1007 |
NCgl1011 | NCgl1013 | NCgl1016 | NCgl1018 | NCgl1022 | NCgl1034 | NCgl1036 | NCgl1038 | NCgl1039 | NCgl1041 |
NCgl1042 | NCgl1043 | NCgl1044 | NCgl1045 | NCgl1046 | NCgl1049 | NCgl1050 | NCgl1052 | NCgl1053 | NCgl1054 |
NCgl1066 | NCgl1073 | NCgl1084 | NCgl1091 | NCgl1140 | NCgl1142 | NCgl1146 | NCgl1152 | NCgl1157 | NCgl1158 |
NCgl1160 | NCgl1168 | NCgl1169 | NCgl1173 | NCgl1177 | NCgl1192 | NCgl1205 | NCgl1223 | NCgl1226 | NCgl1234 |
NCgl1236 | NCgl1254 | NCgl1255 | NCgl1260 | NCgl1274 | NCgl1276 | NCgl1287 | NCgl1297 | NCgl1298 | NCgl1300 |
NCgl1302 | NCgl1303 | NCgl1306 | NCgl1307 | NCgl1309 | NCgl1312 | NCgl1317 | NCgl1335 | NCgl1336 | NCgl1337 |
NCgl1338 | NCgl1339 | NCgl1342 | NCgl1351 | NCgl1352 | NCgl1357 | NCgl1362 | NCgl1368 | NCgl1371 | NCgl1372 |
NCgl1381 | NCgl1382 | NCgl1408 | NCgl1429 | NCgl1435 | NCgl1451 | NCgl1456 | NCgl1457 | NCgl1458 | NCgl1461 |
NCgl1462 | NCgl1475 | NCgl1484 | NCgl1485 | NCgl1508 | NCgl1519 | NCgl1520 | NCgl1526 | NCgl1552 | NCgl1553 |
NCgl1555 | NCgl1556 | NCgl1570 | NCgl1571 | NCgl1579 | NCgl1617 | NCgl1650 | NCgl1651 | NCgl1652 | NCgl1655 |
NCgl1675 | NCgl1676 | NCgl1677 | NCgl1679 | NCgl1680 | NCgl1681 | NCgl1682 | NCgl1683 | NCgl1684 | NCgl1685 |
NCgl1686 | NCgl1687 | NCgl1688 | NCgl1689 | NCgl1690 | NCgl1691 | NCgl1692 | NCgl1693 | NCgl1694 | NCgl1696 |
NCgl1697 | NCgl1698 | NCgl1699 | NCgl1700 | NCgl1701 | NCgl1702 | NCgl1703 | NCgl1704 | NCgl1705 | NCgl1706 |
NCgl1707 | NCgl1708 | NCgl1709 | NCgl1710 | NCgl1711 | NCgl1712 | NCgl1713 | NCgl1714 | NCgl1716 | NCgl1717 |
NCgl1720 | NCgl1721 | NCgl1722 | NCgl1723 | NCgl1726 | NCgl1727 | NCgl1728 | NCgl1729 | NCgl1730 | NCgl1732 |
NCgl1736 | NCgl1737 | NCgl1738 | NCgl1739 | NCgl1740 | NCgl1741 | NCgl1742 | NCgl1743 | NCgl1744 | NCgl1745 |
NCgl1746 | NCgl1747 | NCgl1748 | NCgl1749 | NCgl1750 | NCgl1751 | NCgl1752 | NCgl1753 | NCgl1754 | NCgl1755 |
NCgl1756 | NCgl1757 | NCgl1758 | NCgl1759 | NCgl1761 | NCgl1762 | NCgl1763 | NCgl1764 | NCgl1765 | NCgl1766 |
NCgl1767 | NCgl1768 | NCgl1769 | NCgl1770 | NCgl1771 | NCgl1772 | NCgl1773 | NCgl1774 | NCgl1775 | NCgl1777 |
NCgl1778 | NCgl1779 | NCgl1780 | NCgl1781 | NCgl1782 | NCgl1783 | NCgl1784 | NCgl1785 | NCgl1786 | NCgl1787 |
NCgl1788 | NCgl1789 | NCgl1791 | NCgl1792 | NCgl1793 | NCgl1794 | NCgl1795 | NCgl1796 | NCgl1797 | NCgl1798 |
NCgl1799 | NCgl1800 | NCgl1801 | NCgl1802 | NCgl1803 | NCgl1804 | NCgl1805 | NCgl1806 | NCgl1807 | NCgl1808 |
NCgl1809 | NCgl1810 | NCgl1812 | NCgl1813 | NCgl1814 | NCgl1815 | NCgl1817 | NCgl1818 | NCgl1819 | NCgl1820 |
NCgl1821 | NCgl1822 | NCgl1823 | NCgl1824 | NCgl1826 | NCgl1827 | NCgl1828 | NCgl1829 | NCgl1830 | NCgl1831 |
NCgl1832 | NCgl1833 | NCgl1835 | NCgl1837 | NCgl1838 | NCgl1841 | NCgl1843 | NCgl1844 | NCgl1845 | NCgl1848 |
NCgl1890 | NCgl1891 | NCgl1892 | NCgl1893 | NCgl1894 | NCgl2000 | NCgl2013 | NCgl2036 | NCgl2046 | NCgl2063 |
NCgl2067 | NCgl2068 | NCgl2069 | NCgl2070 | NCgl2085 | NCgl2109 | NCgl2146 | NCgl2147 | NCgl2149 | NCgl2182 |
NCgl2202 | NCgl2216 | NCgl2221 | NCgl2223 | NCgl2225 | NCgl2235 | NCgl2244 | NCgl2247 | NCgl2253 | NCgl2260 |
NCgl2261 | NCgl2262 | NCgl2263 | NCgl2299 | NCgl2317 | NCgl2318 | NCgl2319 | NCgl2330 | NCgl2361 | NCgl2373 |
NCgl2388 | NCgl2403 | NCgl2413 | NCgl2417 | NCgl2420 | NCgl2421 | NCgl2424 | NCgl2427 | NCgl2428 | NCgl2452 |
NCgl2458 | NCgl2461 | NCgl2464 | NCgl2466 | NCgl2469 | NCgl2476 | NCgl2478 | NCgl2483 | NCgl2493 | NCgl2494 |
NCgl2502 | NCgl2503 | NCgl2520 | NCgl2524 | NCgl2529 | NCgl2546 | NCgl2547 | NCgl2548 | NCgl2555 | NCgl2556 |
NCgl2557 | NCgl2561 | NCgl2593 | NCgl2602 | NCgl2609 | NCgl2614 | NCgl2615 | NCgl2620 | NCgl2621 | NCgl2633 |
NCgl2634 | NCgl2635 | NCgl2636 | NCgl2639 | NCgl2643 | NCgl2649 | NCgl2650 | NCgl2657 | NCgl2669 | NCgl2681 |
NCgl2682 | NCgl2701 | NCgl2718 | NCgl2720 | NCgl2721 | NCgl2722 | NCgl2723 | NCgl2724 | NCgl2725 | NCgl2745 |
NCgl2756 | NCgl2758 | NCgl2760 | NCgl2765 | NCgl2782 | NCgl2783 | NCgl2787 | NCgl2788 | NCgl2789 | NCgl2811 |
NCgl2819 | NCgl2820 | NCgl2821 | NCgl2823 | NCgl2824 | NCgl2825 | NCgl2849 | NCgl2850 | NCgl2877 | NCgl2886 |
NCgl2903 | NCgl2904 | NCgl2909 | NCgl2919 | NCgl2920 | NCgl2922 | NCgl2924 | NCgl2951 | NCgl2952 | NCgl2953 |
NCgl2956 | NCgl2957 | NCgl2958 | NCgl2960 | NCgl2963 | NCgl2972 | NCgl2973 | NCgl2975 | NCgl2997 | NCgl3014 |
NCgl3043 | NCgl3047 | NCgl3048 | NCgl3049 | NCgl3050 | NCgl3054 | NCgl3059 | NCgl3060 | NCgl3061 | NCgl3067 |
NCgl3070 | NCgl3071 | NCgl3077 | NCgl3077 | NCgl3078 | NCgl3099 | tnp2f | tnp6a | int2 |
Gene | Putative Donor | Function based on Annotation |
cg1028 | Nitrococcus/Shewanella sp. | Putative restriction-modification system: methylase |
cg1770 | Proteobacteria | DNA or RNA helicase of superfamily II |
cg1985 | Clostridium beijeirnikum | Superfamily I DNA or RNA helicase |
cg3120 | Bacteroides thetaiotaomicron | Hypothetical protein |
NCgl0039 | Acinetoabcter baumanii | Hypothetical membrane protein |
NCgl0059 | Methanosarcina acetivorans | Hypothetical protein |
NCgl0060 | Methanosarcina acetivorans | Mg2+ and Co2+ transporter protein |
NCgl0093 | Leptospira interrogens | Molecular chaperone, HSP90 family |
NCgl0110 | Pseudomonas syringae | deoR family transcriptional regulator of sugar metabolism |
NCgl0115 | Proteobacteria | 3-methyladenine DNA glycosylase |
NCgl0176 | Caulobacter crescentus | Transcriptional regulator |
NCgl0177 | Acinetobacter sp. | Hypothetical membrane protein |
NCgl0220 | Proteobacteria | Monoamine oxidase |
NCgl0221 | Pelobacter carbanolicus | Mg/Co/Ni transporter MgtE |
NCgl0223 | Methylococcus capsulatus | Prephenate dehydrogenase |
NCgl0234 | Natronomonas pharaonis | Hypothetical dioxygenase protein |
NCgl0314 | Vibrio vulnificus | Zn-dependent hydrolase or glyoxylase |
NCgl0349 | Desulfuromonas acetoxidans | Hypothetical membrane protein |
NCgl0734 | Lactobacillus casei | Hypothetical protein |
NCgl0896 | Bacillus subtilis | ABC-type transporter, ATPase component |
NCgl0902 | Shewanella oneidiensis | Ribosomal protein L25 |
NCgl0940 | Bdellovibrio bacteriovorus | Hypothetical protein |
NCgl0980 | Desulfitobacter hafniense | Exonuclease VII small subunit |
NCgl1011 | Mesorhizobium loti | Hypothetical protein |
NCgl1036 | Ralstonia metallidurans | Putative adenylate kinase |
NCgl1038 | Thiomicrospira crunogena | Hypothetical protein |
NCgl1046 | Shewanella putrifaciens | Hypothetical protein |
NCgl1049 | Bacteroides fragilis | Arsenate reductase |
NCgl1168 | Streptococcus pyogenes | Predicted nuclease of the RecB family |
NCgl1260 | Firmicutes | guanosine polyphosphate pyrophosphohydrolases/synthetases |
NCgl1274 | Burkholderia pseudomallei | N6-adenine-specific methylase |
NCgl1287 | Sinorhizobium meliloti | Hypothetical protein |
NCgl1298 | Methanosarcina barkeri | Hypothetical membrane protein |
NCgl1342 | Tropheryma whipplei | N-acetylglutamate kinase |
NCgl1371 | Terrrabacter sp. | 16S rRNA uridine-516 pseudouridylate synthase |
NCgl1372 | Terrrabacter sp. | Cytidylate kinase |
NCgl1381 | Firmicutes | Hypothetical protein |
NCgl1461 | Oceanobaillus iheyensis | Dihydroorotate dehydrogenase |
NCgl1508 | Bdellovibrio bacteriovorus | Cytochrome oxidase assembly protein |
NCgl1687 | Thermotoga maritima | Hypothetical protein |
NCgl1698 | Staphylococcus epidermidis | Hypothetical protein |
NCgl1705 | Proteobacteria | Stress-sensitive restriction system protein 2 |
NCgl1711 | Streptococcus sp. | Hypothetical protein |
NCgl1727 | Geobacter sulfurreducens | Hypothetical membrane protein |
NCgl1739 | Oceanobaillus iheyensis | Hypothetical protein |
NCgl1740 | Lactobacillus delbrueckii | Hypothetical protein |
NCgl1743 | Lactobacillus delbrueckii | Hypothetical protein |
NCgl1748 | Cenarchaeum symbiosum | Periplasmic serine protease |
NCgl1754 | Neurospora crassa | Hypothetical protein |
NCgl1765 | Lactobacillus delbrueckii | Hypothetical protein |
NCgl1777 | Bacillus cereus | Hypothetical protein |
NCgl1778 | Bacillus cereus | Hypothetical protein |
NCgl1779 | Rubrobacter sp. | Micrococcal nuclease-like protein |
NCgl1781 | Rhodopirellula baltica | Hypothetical protein |
NCgl1784 | Staphyloccus sp. | Hypothetical protein |
NCgl1786 | Streptococcus agalactiae | Hypothetical protein |
NCgl1793 | Fungi | Hypothetical protein |
NCgl1806 | Proteobacteria | Integrase |
NCgl1817 | Streptococcus agalactiae | Di- and tricarboxylate transporter |
NCgl1823 | Cenarchaeum symbiosum | Hypothetical protein |
NCgl1841 | Leuconostoc mesenteroides | Hypothetical membrane protein |
NCgl1844 | Mycoplasma hypopneumoniae | DNA-directed RNA polymerase sigma subunit SigB |
NCgl2000 | Desulfitobacter hafniense | Glycerate kinase |
NCgl2068 | Xanthomonas sp. | Isoleucyl-tRNA synthetase |
NCgl2318 | Bacillus clausii | Putative chloromuconate cycloisomerase |
NCgl2427 | Rhodobacter spaeroides | L-aminopeptidase/D-esterase |
NCgl2476 | Burkholderia sp. | Succinyl-CoA synthetase alpha subunit |
NCgl2520 | Magnetospirillum magnetotacticum | Hypothetical protein |
NCgl2555 | Staphylococcus saprophyticus | Glucosamine-6-phosphate isomerase |
NCgl2556 | Magnetospirillum magnetotacticum | N-acetylglucosamine-6-phosphate deacetylase |
NCgl2643 | Actinobacillus succinogenes | N-formylmethionyl-tRNA deformylase |
NCgl2650 | Porphyromonas gingivalis | ABC-type transporter, permease component |
NCgl2725 | Aspergillus nidulans | Hypothetical membrane protein |
NCgl2819 | Bacteroides thetaiotaomicron | Hypothetical protein |
acpA | acpM | acx | add | ahpC | ahpF | alkM | alr | asa | cbpA |
choE | cmk | cysY | deoD | dhbB | dhbE | dhbF | dnaQ | echA4 | entA |
fabG2 | fadB1 | fadE3 | fadH | fes | fxbA | gcp | gcvH | gcvP | gcvT |
glpQ | hisE | hscA | hsdM2 | hsdS2 | htpX | ilvA | jk0009 | jk0012 | jk0018 |
jk0029 | jk0032 | jk0043 | jk0046 | jk0048 | jk0050 | jk0052 | jk0057 | jk0060 | jk0068 |
jk0070 | jk0071 | jk0082 | jk0111 | jk0140 | jk0141 | jk0142 | jk0145 | jk0176 | jk0177 |
jk0178 | jk0189 | jk0196 | jk0199 | jk0200 | jk0203 | jk0206 | jk0208 | jk0217 | jk0227 |
jk0228 | jk0231 | jk0232 | jk0244 | jk0257 | jk0262 | jk0311 | jk0321 | jk0323 | jk0324 |
jk0335 | jk0336 | jk0344 | jk0371 | jk0385 | jk0406 | jk0410 | jk0411 | jk0413 | jk0415 |
jk0428 | jk0434 | jk0435 | jk0439 | jk0442 | jk0443 | jk0447 | jk0462 | jk0485 | jk0488 |
jk0489 | jk0490 | jk0502 | jk0516 | jk0517 | jk0523 | jk0524 | jk0528 | jk0547 | jk0552 |
jk0553 | jk0571 | jk0574 | jk0578 | jk0580 | jk0585 | jk0607 | jk0608 | jk0620 | jk0640 |
jk0641 | jk0642 | jk0643 | jk0644 | jk0645 | jk0646 | jk0647 | jk0648 | jk0649 | jk0650 |
jk0653 | jk0671 | jk0672 | jk0680 | jk0683 | jk0693 | jk0694 | jk0699 | jk0700 | jk0723 |
jk0726 | jk0756 | jk0759 | jk0769 | jk0770 | jk0805 | jk0810 | jk0811 | jk0816 | jk0817 |
jk0821 | jk0824 | jk0826 | jk0859 | jk0893 | jk0894 | jk0895 | jk0907 | jk0916 | jk0923 |
jk0928 | jk0929 | jk0930 | jk0974 | jk0975 | jk1034 | jk1069 | jk1080 | jk1099 | jk1143 |
jk1154 | jk1156 | jk1176 | jk1180 | jk1203 | jk1225 | jk1234 | jk1237 | jk1247 | jk1248 |
jk1249 | jk1250 | jk1274 | jk1276 | jk1284 | jk1287 | jk1305 | jk1307 | jk1310 | jk1319 |
jk1327 | jk1388 | jk1410 | jk1417 | jk1419 | jk1420 | jk1435 | jk1440 | jk1441 | jk1443 |
jk1455 | jk1478 | jk1489 | jk1501 | jk1515 | jk1526 | jk1539 | jk1541 | jk1542 | jk1548 |
jk1552 | jk1555 | jk1567 | jk1569 | jk1571 | jk1572 | jk1573 | jk1575 | jk1580 | jk1590 |
jk1600 | jk1607 | jk1608 | jk1615 | jk1639 | jk1678 | jk1704 | jk1706 | jk1707 | jk1721 |
jk1725 | jk1738 | jk1742 | jk1751 | jk1783 | jk1798 | jk1815 | jk1838 | jk1850 | jk1872 |
jk1874 | jk1881 | jk1889 | jk1903 | jk1904 | jk1913 | jk1924 | jk1947 | jk1950 | jk1953 |
jk1957 | jk1958 | jk1961 | jk1963 | jk2000 | jk2001 | jk2009 | jk2026 | jk2038 | jk2044 |
jk2045 | jk2053 | jk2057 | jk2058 | jk2059 | jk2063 | jk2070 | jk2072 | jk2080 | jk2096 |
kdpA | kdpB | kdpC | kdpD | lipN | matE | mbtG | mnhF | mrr | mxcB |
nanA | ocd | ogt | parB | pbp1A | pepA | pknG | pknJ | pstX | pvdA |
resC | rimJ | rmlC | rplM | rpmD | rpmH | rshA | rubA | sapD | sapE |
sigM | sigW | ssb2 | surA | surB | tcsS2 | thiS | thrC | tnp3504a1 | tnp3504e2 |
tnp3504j2 | tnp3511a | tnp3513a | tnp3516d2 | tnp3522a1 | tnp3522a2 | tnp3524a2 | tnp3526 | tnp3595 | trpE |
uvrA2 | viuB | cjk_0643 |
Gene | Putative Donor | Function based on Annotation |
acpA | Franscisella talurensis | Hypothetical protein |
fes | Yersinia fredrickseni | Putative enterochelin esterase |
jk0335 | Bacillus sp. | Hypothetical protein |
jk0336 | Streptococcus sp. | Putative DNA recombinase |
jk0410 | Bordetella bronchiseptica | Putative transcriptional regulator (LysR family) |
jk0462 | Microbulbifer degradans | Putative helicase |
jk0489 | Carboxydothermus hydrogenoformans | Hypothetical protein |
jk0524 | Thiomicrospira denitrificans | Hypothetical protein |
jk0640 | Streptococcus sp. | Hypothetical protein |
jk0650 | Actinobacillus pleuropneumoniae | Putative nitroreductase family protein |
jk0653 | Actinobacillus pleuropneumoniae | Putative nitroreductase family protein |
jk0683 | Rhodopseudomonas palustris | Hypothetical protein |
jk0894 | Treponema denticola | Hypothetical protein |
jk0929 | Lactobacillus sp. | Putative permease of the major facilitator superfamily |
jk0930 | Treponema denticola | Putative beta-glucosidase |
jk1156 | Sphingopyxis alaskensis | Putative transcriptional regulator (GntR family) |
jk1180 | Thermotoga maritima | Hypothetical protein |
jk1248 | Ralstonia sp. | Hypothetical protein |
jk1284 | Geobacillus kaustophilus | Putative oxidoreductase |
jk1707 | Xanthomonas sp. | Hypothetical protein |
jk1742 | Lactobacillus casei | Hypothetical protein |
jk1838 | Enterococcus faecium | Putative transcriptional regulator (GntR family) |
jk1947 | Leuconostoc mesenteroides | Putative 1-acylglycerol-3-phosphate O-acyltransferase |
jk1950 | Streptococcus sp. | Putative transcriptional regulator (MarR family) |
jk2038 | Burkholderia sp. | Hypothetical protein |
jk2063 | Proteobacteria | Putative flavin-binding monooxygenase |
lipN | Photorhabdus luminescens | Putative lipase/esterase LipN |
pknJ | Rhodoferax ferrireducens | Serine/threonine protein kinase PknJ |
sigM | Mesorhizobium sp. | ECF-family sigma factor M |
surA | Streptococcus sp. | Hypothetical protein |
surB | Lactobacillus sp. | Hypothetical protein |
Department of Biology, McMaster University |
1280 Main Street West, Hamilton, Ontario L8S 4K1 |
Canada |