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Volume 14, Issue 5, May 2024
Investigation
Ribonucleotide reductase inhibition improves the symptoms of a Caenorhabditis elegans model of Alzheimer's disease
Embryonic spatiotemporal expression pattern of Folded gastrulation suggests roles in multiple morphogenetic events and regulation by AbdA
Optimized protocols for RNA interference in Macrostomum lignano
The RU486-dependent activation of the GeneSwitch system in adult muscles leads to severe adverse effects in Drosophila
Validation of positional candidates Rps6ka6 and Pou3f4 for a locus associated with skeletal muscle mass variability
Fas2EB112: a tale of two chromosomes
The cell-cell adhesion molecule Fasciclin II (Fas2) guides nervous system development and acts to preserve epithelial tissue architecture. Here, Finegan et al. solve the genetic mystery of why two different mutations in the fas2 gene in fruit flies cause dramatically different effects. They identify a modifier mutation carried by one of the chromosomes used to study fas2 that disrupts neuroglian (nrg)—a gene that encodes a cell-cell adhesion molecule in the same family as Fas2.
Investigating genomic prediction strategies for grain carotenoid traits in a tropical/subtropical maize panel
The genetic basis of apple shape and size unraveled by digital phenotyping
A maternal-to-zygotic-transition gene block on the zebrafish sex chromosome
Here, Wilson and Postlethwait identify a unique region in zebrafish sex chromosomes that contains protein-coding genes silenced in ovaries but expressed in testes which are then transiently expressed in embryos as they begin to express their own genes. They report that the region also encodes maternal-specific spliceosome components and microRNAs that target maternally-stored RNA for degradation. The authors conclude that this region defines a distinct maternal-to-zygotic-transition block of genes.
Parental thermal environment controls the offspring phenotype in Brook charr (Salvelinus fontinalis): insights from a transcriptomic study
Identification of chemosensory genes in the stingless bee Tetragonisca fiebrigi
The MAB-5/Hox family transcription factor is important for Caenorhabditis elegans innate immune response to Staphylococcus epidermidis infection
Dietary restriction fails to extend lifespan of Drosophila model of Werner syndrome
Regulatory features of Candida albicans hemin-induced filamentation
Strain-specific evolution and host-specific regulation of transposable elements in the model plant symbiont Rhizophagus irregularis
Harnessing the predicted maize pan-interactome for putative gene function prediction and prioritization of candidate genes for important traits
The evolution of the gliotoxin biosynthetic gene cluster in Penicillium fungi
Genome Report
Chromosome-level genome assembly of the European green woodpecker Picus viridis
The European Green Woodpecker, Picus viridis, is found in the Western Palearctic region. Here, Forest et al. assemble a highly contiguous genome assembly for this species using a combination of short- and long-read sequencing and scaffolded with chromatin conformation capture (Hi-C). The assembly and annotations produced in this study will help further research into the genomics of P. viridis and the comparative evolution of woodpeckers.
Assembly and analysis of the genome of Notholithocarpus densiflorus
A genome sequence for the threatened whitebark pine
Whitebark pine (Pinus albicaulis), a white pine of western North American subalpine regions, has become critically threatened throughout its range by white pine blister rust fungus (WPBR), mountain pine beetle, wildfire, and maladaptation from changing climate—vast acreages have suffered nearly complete mortality from WPBR. As genomic data can contribute to faster, cost-effective approaches for identifying disease-resistant, climate-adapted seed sources for restoration, Neale et al. present a high-quality reference sequence and annotation—a marked improvement in candidate WPBR-disease-resistance gene identification compared to previous assessments.