Subject: New issue: Genome Biology and Evolution, Volume 17, Issue 11, November 2025

Volume 17, Issue 11, November 2025

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Special Section: de novo genes

Review

De Novo Gene Emergence: Summary, Classification, and Challenges of Current Methods

Anna Grandchamp and others

Highlights

Highlight: Genome Duplication in a New Zealand Snail Holds Clues for the Persistence of (A)sexual Reproduction

Pedro Andrade

Review

HJ Muller and the Relationship Between Sex Chromosome Degeneration and the Evolution of Dosage Compensation

Brian Charlesworth and Deborah Charlesworth

Perspective

The Genomic Kaleidoscope: On the Hidden Dimensions of Within-Species Genomic Diversity

Marina BrasÃ³-Vives and others

Letters

An Ocean of Opsins

Giacinto De Vivo and others

Acquisition of Spacers from Foreign Prokaryotic Genomes by CRISPR-Cas Systems in Natural Environments

Katharina Sures and others

Articles

Episodic and Ongoing Mechanisms Drive Plastid-Derived Nuclear DNA Evolution in Angiosperms

Juan Pablo Marczuk-Rojas and others

Phylogeny-aware Simulations Suggest a Low Impact of Unsampled Lineages in the Inference of Gene Flow During Eukaryogenesis

MoisÃ¨s Bernabeu and others

Whole-Genome Sequence of Potamopyrgus antipodarum'A Model System for the Maintenance of Sexual Reproduction'Reveals a Recent Whole-Genome Duplication

Joseph Jalinsky and others

Structural Rearrangements and Selection Promote Phenotypic Evolution in Anolis Lizards

RaÃºl Araya-Donoso and others

Inferring Domestic Goat Demographic History Through Ancient Genome Imputation

Jolijn A M Erven and others

Large Inversion Polymorphisms are Widespread in North American Songbirds

Teresa M Pegan and Benjamin M Winger

Paleogenomics Reveals a Loss of Bovine Lineages in Mid-latitude Asia Over the Last 200,000 Years

Alexandre Gilardet and others

Testing the Mother's Curse Hypothesis in Human Mitochondrial Genome Evolution

Ruiqi Yuan and Jianzhi Zhang

SmithRNAs: A Common Feature among Metazoa

Giovanni Marturano and others

Chromosome-scale Genomes Show Rapid Diversification and Ancient Gene Flow Among Bear Species

T Brock Wooldridge and others

Natural Selection in Transcription Factor'DNA Interaction Motifs: A Comparative and Population Genomics Perspective

Manas Joshi and others

Molecular and Functional Divergence of Zebrafish Sox Paralogs Controlling Endoderm Formation and Left'Right Patterning

Simaran Johal and others

Diversification of the Staphylococcal Cassette Chromosome Through Distinct Mechanisms of Horizontal Transfer

HÃ©loÃ¯se Muller and Cheryl P Andam

Methods

Covering All Bases: A Universal Metazoan UCE Probe Set to Democratize Phylogenomics

Shahan Derkarabetian and others

Species Tree Branch Length Estimation despite Incomplete Lineage Sorting, Duplication, and Loss

Yasamin Tabatabaee and others

Genome Resource

Nuclear and Mitochondrial Genome Assemblies of Indrella ampulla, a Terrestrial Gastropod Endemic to the Western Ghats

Gopi Krishnan and others

Society for Molecular Biology and Evolution

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