Subject: Genome Biology and Evolution Table of Contents for January 2025 Oxford Academic
 
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Special Sections
 

Explore Special Sections published in issues of Genome Biology and Evolution, with the most recent being the Special Section: Genomics of Adaptations to Extreme Environments, with Guest Editors Allie Graham and Emily Kopania. Read this Special Section and others featured in the journal.

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Genome Biology and Evolution  
Volume 17 Issue 1
 
January 2025
 
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Review
 
 
 
 
Adaptation in the Alleyways: Candidate Genes Under Potential Selection in Urban Coyotes 
 
Samantha E S Kreling, Summer E Vance, Elizabeth J Carlen
 
 
 
Articles
 
 
 
 
Novel Toxin Biosynthetic Gene Cluster in Harmful Algal Bloom-Causing Heteroscytonema crispum: Insights into the Origins of Paralytic Shellfish Toxins 
 
David B Stern, R Taylor Raborn, Sean P Lovett, Noelani R Boise, Lakeshia Carrasquilla ...
 
 
 
Novel High-Quality Amoeba Genomes Reveal Widespread Codon Usage Mismatch Between Giant Viruses and Their Hosts 
 
Anouk Willemsen, Alejandro Manzano-Marín, Matthias Horn
 
 
 
Convergent Evolution Has Led to the Loss of Claw Proteins in Snakes and Worm Lizards 
 
Karin Brigit Holthaus, Julia Steinbinder, Attila Placido Sachslehner, Leopold Eckhart
 
 
 
The Complex Epigenetic Panorama in the Multipartite Genome of the Nitrogen-Fixing Bacterium Sinorhizobium meliloti  
 
Iacopo Passeri, Lisa Cangioli, Marco Fondi, Alessio Mengoni, Camilla Fagorzi
 
 
 
 
Single-Cell Transcriptomics Reveals Evolutionary Reconfiguration of Embryonic Cell Fate Specification in the Sea Urchin Heliocidaris erythrogramma 
 
Abdull J Massri, Alejandro Berrio, Anton Afanassiev, Laura Greenstreet, Krista Pipho ...
 
 
 
Bacterial Growth Temperature as a Horizontally Acquired Polygenic Trait  
 
Anne A Farrell, Camilla L Nesbø, Olga Zhaxybayeva
 
 
 
Population Genomics of Japanese Macaques (Macaca fuscata ): Insights Into Deep Population Divergence and Multiple Merging Histories 
 
Atsunori Higashino, Katsuki Nakamura, Naoki Osada
 
 
 
Horizontal Transfer and Recombination Fuel Ty4 Retrotransposon Evolution in Saccharomyces  
 
Jingxuan Chen, David J Garfinkel, Casey M Bergman
 
 
 
Evolutionary Genomics of Two Co-occurring Congeneric Fore Reef Coral Species on Guam (Mariana Islands) 
 
Héctor Torrado, Dareon Rios, Karim Primov, David R Burdick, Bastian Bentlage ...
 
 
 
 
Inferring the Demographic History of Aye-Ayes ( Daubentonia madagascariensis) from High-Quality, Whole-Genome, Population-Level Data 
 
John W Terbot, II, Vivak Soni, Cyril J Versoza, Susanne P Pfeifer, Jeffrey D Jensen
 
 
 
CAT-Posterior Mean Site Frequencies Improves Phylogenetic Modeling Under Maximum Likelihood and Resolves Tardigrada as the Sister of Arthropoda Plus Onychophora 
 
Mattia Giacomelli, Matteo Vecchi, Roberto Guidetti, Lorena Rebecchi, Philip C J Donoghue ...
 
 
 
A Complete Assembly and Annotation of the American Shad Genome Yields Insights into the Origins of Diadromy 
 
Jonathan P Velotta, Azwad R Iqbal, Emma S Glenn, Ryan P Franckowiak, Giulio Formenti ...
 
 
 
The B Chromosome of Pseudococcus viburni: A Selfish Chromosome that Exploits Whole-Genome Meiotic Drive 
 
Isabelle M Vea, Andrés G de la Filia, Kamil S Jaron, Scott E J Barlow, Marion Herbette ...
 
 
 
Investigating the Impact of Whole-Genome Duplication on Transposable Element Evolution in Teleost Fishes 
 
Rittika Mallik, Dustin J Wcisel, Thomas J Near, Jeffrey A Yoder, Alex Dornburg
 
 
 
Genome Resources
 
 
 
 
Chromosome-Scale Genomes of the Flightless Caterpillar Hunter Beetles Calosoma tepidum and Calosoma wilkesii From British Columbia (Coleoptera: Carabidae) 
 
Jérémy Gauthier, Mickael Blanc, Emmanuel F A Toussaint
 
 
 
Chromosome-level Genome Assembly and Annotation of the Arctic Moss Ptychostomum knowltonii  
 
Changling Ma, Xuping Zhou, Dan Huang, Li Zhang, Yifeng Yao ...
 
 
 
Nuclear and Mitochondrial Genome Assemblies for the Endangered Wood-Decaying Fungus Somion occarium  
 
Rowena Hill, Jamie McGowan, Vendula Brabcová, Seanna McTaggart, Naomi Irish ...
 
 
 
Chromosome-Scale Assembly of Capsella orientalis, Maternal Progenitor of Cosmopolitan Allotetraploid C. bursa-pastoris 
 
Alexandra M Kasianova, Vladislav D Mityukov, Dmitry A German, Artem S Kasianov, Aleksey A Penin ...
 
 
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