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Volume 641 Issue 8062, 8 May 2025
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Volume 641 Issue 8062, 8 May 2025

Relative gains

Ever since the human genome was sequenced, efforts have been ongoing to sequence genomes from our closest primate relatives for comparison. But the genomes of other ape species are both large and contain significant repetition, making them difficult to sequence, thus limiting comparative studies into human and primate evolution. In this week’s issue, Evan Eichler and colleagues fill this gap by presenting what are essentially 100% complete genome sequences for species that represent the six main ape lineages: chimpanzee (Pan troglodytes), bonobo (Pan paniscus), gorilla (Gorilla gorilla, pictured on the cover), Bornean orangutan (Pongo pygmaeus), Sumatran orangutan (Pongo abelii) and siamang (Symphalangus syndactylus). The new sequences now match the recently completed full human genome sequence in terms of quality, enabling analysis of previously inaccessible parts of the genomes such as centromeres, and highlighting previously uncharacterized lineage-specific genes. The researchers note that these six genomes can act as a foundation for future evolutionary studies of humans and our ape relatives.

Cover image: MJ Photography/Alamy.

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    • This Review provides an overview of progress and future directions in the development of nasally administered vaccines for respiratory infections.

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    • Generalization of a quantum twisting microscope to cryogenic temperatures in twisted bilayer graphene shows the ability to map phononic dispersions through inelastic momentum-conserving tunnelling and reveals an angle-dependent coupling between electrons and phonons.

      • J. Birkbeck
      • J. Xiao
      • S. Ilani
      Article Open Access
    • A size-sieved complex precipitation in Sc-added Al–Mg alloys achieves a high-density dispersion of both fine Al3Sc nanoprecipitates and in situ formed core-shell Al3(Mg, Sc)2/Al3Sc nanophases with high hydrogen-trapping ability.

      • Shengyu Jiang
      • Yuantao Xu
      • Jun Sun
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    • A one-step process using fossil-free hydrogen-plasma-based reduction is used to extract nickel from low-grade ore and create high-grade ferronickel alloys, providing a more sustainable and environmentally friendly method for obtaining nickel.

      • U. Manzoor
      • L. Mujica Roncery
      • I. R. Souza Filho
      Article Open Access
    • Climate models, impact models and demographic data are used to estimate the number of people projected to experience unprecedented lifetime exposure to extreme climate events across multiple dimensions, including birth year, warming scenario and vulnerability.

      • Luke Grant
      • Inne Vanderkelen
      • Wim Thiery
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    • 3D seismic reflection images of the lithosphere–asthenosphere boundary beneath Axial volcano show a magma assimilation front that focuses magmatism towards the centre of the volcano, controlling both eruption and hydrothermal processes.

      • G. M. Kent
      • A. F. Arnulf
      • S. Saustrup
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    • Geochemistry and geochronology show that Samoa and Rurutu–Arago are the longest-lived Pacific hotspots, providing better constraints on plate rotation and support for a link between the Louisville volcanic track and the Ontong Java Nui Plateau.

      • J. G. Konter
      • V. A. Finlayson
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    • Key measures of biodiversity were quantified and found to be affected by human pressures that shifted community composition and decreased local diversity across terrestrial, freshwater and marine ecosystems.

      • François Keck
      • Tianna Peller
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    • Complete sequences of chromosomes telomere-to-telomere from chimpanzee, bonobo, gorilla, Bornean orangutan, Sumatran orangutan and siamang provide a comprehensive and valuable resource for future evolutionary comparisons.

      • DongAhn Yoo
      • Arang Rhie
      • Evan E. Eichler
      Article Open Access
    • Exome sequencing of 851 trios from more than 2,500 individuals finds 187 genes with de novo mutations that contribute to meningomyelocele (spina bifida) and highlights critical pathways required for neural tube closure.

      • Yoo-Jin Jiny Ha
      • Ashna Nisal
      • Joseph G. Gleeson
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    • Acute stress activates autophagy in the lateral habenula, whereas chronic stress suppresses it, with this autophagy having a causal role in maintaining emotional homeostasis against stress, and its restoration through autophagy enhancers offers a novel antidepressant strategy.

      • Liang Yang
      • Chen Guo
      • Yihui Cui
      Article Open Access
    • Using a natural experiment that avoids common bias concerns, this study finds that the live-attenuated shingles vaccine reduced the probability of a new dementia diagnosis within a follow-up period of 7 years by approximately one-fifth.

      • Markus Eyting
      • Min Xie
      • Pascal Geldsetzer
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    • A study using flies of the genus Drosophila adapted to life in diverse thermal environments shows how evolution has shaped temperature preference by acting on both molecular heat receptors and thermosensory circuits in the flies.

      • Matthew Capek
      • Oscar M. Arenas
      • Marco Gallio
      Article
    • Neonatal antibiotic use is shown to reduce immune response to infant vaccines, accompanied by reduced abundance of Bifidobacteria in the gut microbiota, with experiments in mice indicating that probiotic therapy could be beneficial.

      • Feargal J. Ryan
      • Michelle Clarke
      • David J. Lynn
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    • Germinal centre B cells modify their mutation rate to preserve high-affinity receptors, thereby safeguarding high-affinity B cell lineages and enhancing the outcomes of antibody affinity maturation.

      • Julia Merkenschlager
      • Andrew G. T. Pyo
      • Michel C. Nussenzweig
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    • Results of a multicentre phase 1 clinical trial evaluating treatment with the engineered herpes simplex virus VG161 in advanced liver cancer indicate a good safety profile and promising efficacy.

      • Yinan Shen
      • Xueli Bai
      • Tingbo Liang
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    • A study examines functional human endogenous fatty acid synthase and characterizes its structural dynamics using single-particle cryo-electron microscopy, providing insights into its dynamics during the fatty acid synthesis condensing cycle.

      • Wooyoung Choi
      • Chengmin Li
      • Yifan Cheng
      Article Open Access
    • GluA2-containing AMPA receptors (AMPARs) are not Ca2+ impermeable, and their ability to transport Ca2+ is shaped by the subunit composition of AMPAR tetramers as well as the orientation of transmembrane AMPAR regulatory proteins and cornichon auxiliary subunits.

      • Federico Miguez-Cabello
      • Xin-tong Wang
      • Derek Bowie
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