This site is managed by Brian Golding. Note that entries are
retained for only thirty days. Currently only
GBE,
JME,
MBE,
and PNAS (selected articles),
are provided.
| Sep 20 12:00 | Phenotype bias determines how natural RNA structures occupy the morphospace of all possible shapes - Kamaludin Dingle, Fatme Ghaddar, Petr Šulc, Ard A Louis (MBE)
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| Sep 20 12:00 | Avian neo-sex chromosomes reveal dynamics of recombination suppression and W degeneration - Hanna Sigeman et al. (MBE)
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| Sep 20 12:00 | Butyrate-production pathway abundances are similar in human and nonhuman primate gut microbiomes - Elizabeth K Mallott, Katherine R Amato (MBE)
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| Sep 18 08:00 | Haplotype divergence supports long-term asexuality in the oribatid mite Oppiella nova - Alexander Brandt et al. (PNAS)
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| Sep 18 08:00 | The evolution of social parasitism in Formica ants revealed by a global phylogeny - Marek L. Borowiec, Stefan P. Cover, Christian Rabeling (PNAS)
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| Sep 17 12:00 | Plastome structural evolution and homoplastic inversions in Neo-Astragalus (Fabaceae) - Joseph L M Charboneau et al. (GBE)
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| Sep 17 12:00 | Faster rates of molecular sequence evolution in reproduction-related genes and in species with hypodermic sperm morphologies - R Axel W Wiberg, Jeremias N Brand, Lukas Schärer (MBE)
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| Sep 17 12:00 | Hidden historical habitat-linked population divergence and contemporary gene flow of a deep-sea patellogastropod limpet - Ting Xu et al. (MBE)
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| Sep 16 12:00 | Population structure, genetic connectivity, and signatures of local adaptation of the giant black tiger shrimp (Penaeus monodon) throughout the Indo-Pacific Region - Nga T T Vu et al. (GBE)
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| Sep 15 08:00 | Emergent RNA-RNA interactions can promote stability in a facultative phototrophic endosymbiosis - Benjamin H. Jenkins et al. (PNAS)
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| Sep 14 12:00 | Microbial phylogenetic context using phylogenetic outlines - Caner Bagci, David Bryant, Banu Cetinkaya, Daniel H Huson (GBE)
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| Sep 14 12:00 | Rapid macrosatellite evolution promotes X-Linked hybrid male sterility in a feline interspecies cross - Kevin R Bredemeyer et al. (MBE)
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| Sep 13 12:00 | Evolution of functional diversity in the holozoan tyrosine kinome - Wayland Yeung et al. (MBE)
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| Sep 13 12:00 | Comparative genomics sheds light on the convergent evolution of miniaturized wasps - Hongxing Xu et al. (MBE)
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| Sep 11 08:00 | Mutational signatures of replication timing and epigenetic modification persist through the global divergence of mutation spectra across the great ape phylogeny - Michael E Goldberg, Kelley Harris (GBE)
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| Sep 11 08:00 | Erratum to: The Transposable Element Environment of Human Genes Differs According to Their Duplication Status and Essentiality - Margot Correa et al. (GBE)
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| Sep 11 08:00 | Predator-induced maternal effects determine adaptive antipredator behaviors via egg composition - Sakshi Sharda, Tobias Zuest, Matthias Erb, Barbara Taborsky (PNAS)
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| Sep 10 12:00 | Sharp increase of problematic mitogenomes of birds: causes, consequences and remedies - George Sangster, Jolanda A Luksenburg (GBE)
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| Sep 10 12:00 | Phenotypic and transcriptomic responses to stress differ according to population geography in an invasive species - Pierre Marin et al. (GBE)
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| Sep 10 08:00 | Comparative genomics provides insights into the aquatic adaptations of mammals - Yuan Yuan et al. (PNAS)
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| Sep 9 12:00 | An ancient adenosine receptor gains olfactory function in bony vertebrates - Daniel Kowatschew, Sigrun I Korsching (GBE)
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| Sep 9 12:00 | Genome-wide association and selective sweep studies reveal the complex genetic architecture of DMI fungicide resistance in Cercospora beticola - Rebecca Spanner et al. (GBE)
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| Sep 9 12:00 | A Chromosome-Level Genome Assembly of the Reed Warbler (Acrocephalus scirpaceus) - Camilla Lo Cascio Sætre et al. (GBE)
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| Sep 9 12:00 | Multiple Sources of Introduction of North American Arabidopsis thaliana From Across Eurasia - Gautam Shirsekar et al. (MBE)
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| Sep 9 08:00 | Ancestral polymorphisms shape the adaptive radiation of Metrosideros across the Hawaiian Islands - Jae Young Choi et al. (PNAS)
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| Sep 8 12:00 | Extensive horizontal gene transfer within and between species of coagulase-negative Staphylococcus - Joshua T Smith, Cheryl P Andam (GBE)
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| Sep 8 12:00 | Infections by transovarially transmitted DMelSV in Drosophila have no impact on ovarian transposable element transcripts but increase their amounts in the soma - Marlène Roy et al. (GBE)
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| Sep 8 12:00 | Selection on accessible chromatin regions in Capsella grandiflora - Robert Horvath et al. (MBE)
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| Sep 7 12:00 | Altering the binding properties of PRDM9 partially restores fertility across the species boundary - Benjamin Davies et al. (MBE)
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| Sep 7 12:00 | Two functional epithelial sodium channel isoforms are present in rodents despite pronounced evolutionary pseudogenisation and exon fusion - Sean M Gettings et al. (MBE)
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| Sep 6 08:00 | A Positively Selected MAGEE2 LoF Allele Is Associated with Sexual Dimorphism in Human Brain Size and Shows Similar Phenotypes in Magee2 Null Mice - Michał Szpak et al. (MBE)
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| Sep 4 12:00 | Projecting ancient ancestry in modern-day Arabians and Iranians: a key role of the past exposed Arabo-Persian Gulf on human migrations - Joana C Ferreira et al. (GBE)
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| Sep 4 12:00 | Whole-genome duplications and the diversification of the Globin-X Genes of vertebrates - Federico G Hoffmann et al. (GBE)
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| Sep 4 12:00 | Recombination marks the evolutionary dynamics of a recently endogenized retrovirus - Lei Yang et al. (MBE)
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| Sep 4 12:00 | Evolution of methyltransferase like (METTL) proteins in Metazoa: A complex gene family involved in epitranscriptomic regulation and other epigenetic processes - Juliet M Wong, Jose M Eirin-Lopez (MBE)
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| Sep 3 08:00 | The transposable elements of the Drosophila serrata reference panel - Zachery Tiedeman, Sarah Signor (GBE)
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| Sep 3 08:00 | Deep-time climate legacies affect origination rates of marine genera - Gregor H. Mathes, Wolfgang Kiessling, Manuel J. Steinbauer (PNAS)
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| Sep 2 08:00 | Inner Workings: Reeling in answers to the "freshwater fish paradox" - Amy McDermott (PNAS)
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| Sep 1 16:00 | The ancient Salicoid genome duplication event: A platform for reconstruction of de Novo gene evolution in Populus trichocarpa - Timothy B Yates et al. (GBE)
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| Sep 1 16:00 | Satellite-like W Elements: repetitive, transcribed, and putative mobile genetic factors with potential roles for biology and evolution of Schistosoma mansoni - Maria Stitz et al. (GBE)
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| Sep 1 16:00 | A daily-updated database and tools for comprehensive SARS-CoV-2 mutation-annotated trees - Jakob McBroome et al. (MBE)
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| Sep 1 16:00 | A New World Monkey Resembles Human in Bitter Taste Receptor Evolution and Function via a Single Parallel Amino Acid Substitution - Hui Yang et al. (MBE)
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| Sep 1 16:00 | Drosophila Evolution over Space and Time (DEST) - A New Population Genomics Resource - Martin Kapun et al. (MBE)
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| Sep 1 16:00 | A probabilistic model for indel evolution: differentiating insertions from deletions - Gil Loewenthal et al. (MBE)
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| Sep 1 08:00 | Mass of genes rather than master genes underlie the genomic architecture of amphibian speciation - Christophe Dufresnes et al. (PNAS)
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| Sep 1 08:00 | Assessing the origins of the European Plagues following the Black Death: A synthesis of genomic, historical, and ecological information - Barbara Bramanti, Yarong Wu, Ruifu Yang, Yujun Cui, Nils Chr. Stenseth (PNAS)
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| Aug 31 20:00 | Alpha satellite insertion close to an ancestral centromeric region - Giuliana Giannuzzi et al. (MBE)
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| Aug 31 20:00 | A positively-selected MAGEE2 LoF allele is associated with sexual dimorphism in human brain size, and shows similar phenotypes in Magee2 null mice - Michał Szpak et al. (MBE)
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| Aug 31 12:00 | Convergent phenotypic evolution of rhodopsin for dim-light sensing across deep-diving vertebrates - Yu Xia et al. (MBE)
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| Aug 31 08:00 | Fitting the standard genetic code into its triplet table - Michael Yarus (PNAS)
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| Aug 30 12:00 | TIAMMAt: Leveraging biodiversity to revise protein domain models, evidence from innate immunity - Michael G Tassia, Kyle T David, James P Townsend, Kenneth M Halanych (MBE)
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| Aug 30 12:00 | Two Genomic Loci Control Three Eye Colors in the Domestic Pigeon (Columba livia) - Emily T Maclary et al. (MBE)
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| Aug 27 16:00 | Parallel independent losses of g-type lysozyme genes in hairless aquatic mammals - Xiaoqing Zhang et al. (GBE)
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| Aug 27 16:00 | Horizontal transfer of microbial toxin genes to gall midge genomes - Verster Kirsten I, Rebecca L Tarnopol, Saron M Akalu, Noah K Whiteman (GBE)
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| Aug 26 12:00 | Conserved and unique transcriptional features of pharyngeal arches in the skate (Leucoraja erinacea) and evolution of the jaw - Christine Hirschberger et al. (MBE)
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| Aug 26 12:00 | Phylogenetic Signal, Congruence, and Uncertainty across Bacteria and Archaea - Carolina A Martinez-Gutierrez, Frank O Aylward (MBE)
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| Aug 26 12:00 | Rapid shifts in mitochondrial tRNA import in a plant lineage with extensive mitochondrial tRNA gene loss - Jessica M Warren et al. (MBE)
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| Aug 26 12:00 | Evolutionary profile for (host and viral) MLKL indicates its activities as a battlefront for extensive counteradaptation - Suzette Palmer, Sruthi Chappidi, Chelsea Pinkham, Dustin C Hancks (MBE)
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| Aug 25 16:00 | Strong within-host selection in a maternally inherited obligate symbiont: Buchnera and aphids - Julie Perreau, Bo Zhang, Gerald P. Maeda, Mark Kirkpatrick, Nancy A. Moran (PNAS)
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| Aug 25 12:00 | Mitogenomes of Accipitriformes and Cathartiformes were subjected to ancestral and recent duplications followed by gradual degeneration - Adam Dawid Urantowka et al. (GBE)
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| Aug 25 12:00 | Intraspecific transcriptome variation and sex-biased expression in Anopheles arabiensis - Vivek Jayaswal et al. (GBE)
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| Aug 25 12:00 | Emerging SARS-CoV-2 diversity revealed by rapid whole genome sequence typing - Ahmed M Moustafa, PhD, Paul J Planet, PhD (GBE)
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| Aug 25 12:00 | Taxonomic Uncertainty and the Anomaly Zone: Phylogenomics Disentangle a Rapid Radiation to Resolve Contentious Species (Gila robusta complex) in the Colorado River - Tyler K Chafin et al. (GBE)
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| Aug 25 12:00 | Coevolution between MHC Class I and Antigen-Processing Genes in Salamanders - Gemma Palomar et al. (MBE)
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| Aug 24 16:00 | The evolution of targeted cannibalism and cannibal-induced defenses in invasive populations of cane toads - Jayna L. DeVore, Michael R. Crossland, Richard Shine, Simon Ducatez (PNAS)
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| Aug 24 12:00 | Causes and consequences of purifying selection on SARS-CoV-2 - Atahualpa Castillo Morales et al. (GBE)
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| Aug 24 12:00 | Phylogenomic analysis of velvet worms (Onychophora) uncovers an evolutionary radiation in the Neotropics - Caitlin M Baker, Rebecca S Buckman-Young, Cristiano S Costa, Gonzalo Giribet (MBE)
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| Aug 24 08:00 | Analysis of Fungal Genomes Reveals Commonalities of Intron Gain or Loss and Functions in Intron-Poor Species - Chun Shen Lim, Brooke N Weinstein, Scott W Roy, Chris M Brown (MBE)
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| Aug 23 08:00 | Molecular Clocks and Archeogenomics of a Late Period Egyptian Date Palm Leaf Reveal Introgression from Wild Relatives and Add Timestamps on the Domestication - Oscar A Pérez-Escobar et al. (MBE)
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