This site is managed by Brian Golding. Note that entries are
retained for only thirty days. Currently only
GBE,
JME,
MBE,
and PNAS (selected articles),
are provided.
| Oct 12 14:03 | Phylogeny-aware simulations suggest a low impact of unsampled lineages in the inference of gene flow during eukaryogenesis
by Moisès Bernabeu and others
(GBE)
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| Oct 12 14:03 | Before the East African radiation: sex chromosome systems in basal haplotilapiine cichlids
by Kristen A Behrens and others
(GBE)
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| Oct 11 14:03 | Navigating sampling bias in discrete phylogeographic analysis: assessing the performance of an adjusted Bayes factor
by Fabiana Gámbaro and others
(MBE)
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| Oct 11 14:03 | The genomic imprint of chromosomal inversions and demographic history in island populations of deer mice
by Emma K Howell and others
(MBE)
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| Oct 10 14:03 | Genomic Insights into Convergent Evolution: Adaptation to Rocky Habitats in Rock-inhabiting Fungi
by Rong Fu and others
(MBE)
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| Oct 10 14:03 | Interpreting supervised machine learning inferences in population genomics using haplotype matrix permutations
by Linh N Tran and others
(MBE)
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| Oct 9 17:03 | Comprehensive Mutational Landscape of Yeast Mutator Strains Reveals the Genetic Basis of Mutational Signatures in Cancer
by Lei Liu and others
(MBE)
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| Oct 9 17:03 | Largest-Scale Genomic Resource Reconstructing the Genetic Origin, Population Structure, and Biological Adaptations of the Hui People
by Guanglin He and others
(MBE)
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| Oct 9 17:03 | Joint effects of balancing selection and population bottlenecks on the evolution of a regulatory region of human anti-viralAPOBEC3
by Naoko T Fujito and others
(GBE)
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| Oct 9 17:03 | Chromosome-scale genomes show rapid diversification and ancient gene flow among bear species
by T Brock Wooldridge and others
(GBE)
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| Oct 8 20:00 | Correction for Quintero, The diffused evolutionary dynamics of morphological novelty - (PNAS)
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| Oct 8 20:00 | Correction for Bawa et al., Prevalence of monogamy at the level of flowers in plants - (PNAS)
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| Oct 8 20:00 | Reply to Koplenig and Wolfer: Global language analyses must account for relationships, location, and unbalanced binary data - Xia Hua, et al. (PNAS)
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| Oct 8 20:00 | Statistical errors undermine claims about the evolution of polysynthetic languages - Alexander Koplenig, et al. (PNAS)
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| Oct 8 20:00 | Heterochronic shifts in a timing-keeping microRNA are associated with multiple instances of neoteny in plants - Aaron R. , et al. (PNAS)
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| Oct 8 20:00 | Functional genetic elements of a butterfly mimicry supergene - Nicholas W. , et al. (PNAS)
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| Oct 8 14:03 | Highlight: A Century of Genomic Data Preserved in Museums Illuminates Bird Conservation in Ethiopia
by Pedro Andrade
(GBE)
|
| Oct 6 17:03 | Rapid radiations outweigh reticulations during the evolution of a 750-million-year-old lineage of cyanobacteria
by Carlos J Pardo-De la Hoz and others
(MBE)
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| Oct 6 17:03 | Laboratory Evolution Reveals Transcriptional Mechanisms Underlying Thermal Adaptation of Escherichia coli
by Kevin Rychel and others
(GBE)
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| Oct 6 16:00 | The timeframe of prediction for eco-evolutionary dynamics - Luis-Miguel Chevina, et al. (PNAS)
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| Oct 6 16:00 | Taking evo-devo to the next level - Leslea J. , et al. (PNAS)
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| Oct 6 16:00 | Phylogenomics redefines the evolutionary history of mosquitoes - Mac P. , et al. (PNAS)
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| Oct 5 14:03 | Examination of germline and somatic intercellular bridges in Hydra vulgaris reveals insights into the evolutionarily conserved mechanism of intercellular bridge formation
by Kari L Price and others
(MBE)
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| Oct 4 17:03 | Tandem Gene Clusters as Phylogenetic Anchors Reveal the Hidden History of Vertebrate Visual Opsins
by David Lagman and others
(MBE)
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| Oct 4 16:00 | Efficient mathematical methodology to determine multistep mutant burden in spatially growing cell populations - Natalia L , et al. (PNAS)
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| Oct 3 17:03 | High conservation of translation-enabling RNA editing sites in hyper-editing ferns implies they are not selectively neutral
by Farley M Kwok van der Giezen and others
(MBE)
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| Oct 1 12:00 | How to upgrade stolen organelles into permanent plastids: A comparative transcriptomic perspective - Norico Yamada, et al. (PNAS)
|
| Sep 30 17:03 | Spread of a single superclone drives insecticide resistance in Acyrthosiphon kondoi across an invasive range
by Joshua A Thia and others
(MBE)
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| Sep 30 12:00 | Genetic, phenotypic, and environmental drivers of local adaptation and climate change-induced maladaptation in a migratory songbird - Marina D. , et al. (PNAS)
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| Sep 30 12:00 | Cranial modularity drives phenotypic diversification and adaptive radiation of Antarctic icefishes - Mayara P. , et al. (PNAS)
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| Sep 30 12:00 | Chemical characterization of C31 sterols from sponges and Neoproterozoic fossil sterane counterparts - Lubna Shawar, et al. (PNAS)
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| Sep 29 17:03 | Transposable element-mediated cis-regulation drives the evolution of dmrt1 as a candidate master sex-determining gene in black carp
by Jiamin Guo and others
(MBE)
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| Sep 29 17:03 | SegMantX: a novel tool for detecting DNA duplications uncovers prevalent duplications in plasmids
by Dustin M Hanke and Tal Dagan
(MBE)
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| Sep 29 17:03 | Resolving the stasis-dynamism paradox: Genome evolution in tree ferns
by Zuoying Wei and others
(MBE)
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| Sep 29 17:03 | The evolution of function in the DNA binding domain of the CRP/FNR family
by Madhumitha Krishnaswamy and Aswin Sai Narain Seshasayee
(GBE)
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| Sep 29 17:03 | De novo genome sequence assembly of the RNAi-tractable Paramecium bursaria 186b an endosymbiotic model system
by Guy Leonard and others
(GBE)
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| Sep 29 17:03 | Hemoglobin-gene cluster deletions in Antarctic white-blooded icefishes facilitated by transposable elements
by Thomas Desvignes and others
(GBE)
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| Sep 29 17:03 | High-quality draft genome for Armillaria mexicana, a recently described species in North America
by Jane E Stewart and others
(GBE)
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| Sep 28 20:03 | Evolution of sex-biased gene expression during transitions to separate sexes in the Silene genus
by Djivan Prentout and others
(MBE)
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| Sep 28 20:03 | Accessible, realistic genome simulation with selection using stdpopsim
by Graham Gower and others
(MBE)
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| Sep 28 20:03 | Spectral Tuning in Mammalian Melanopsins
by Richard J McDowell and others
(MBE)
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| Sep 28 20:03 | Ancient Genomics Reveals the Origin, Dispersal, and Human Management of East Asian Domestic Pigs
by Yu Han and others
(MBE)
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| Sep 27 20:03 | Evolutionary refinement of mitochondrial and plastid targeting sequences coincides with the late diversification of land plants
by Parth K Raval and others
(MBE)
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| Sep 27 20:03 | Comprehensive annotation of olfactory and gustatory receptor genes and transposable elements revealed their evolutionary dynamics in aphids
by Sergio Gabriel Olvera-Vazquez and others
(MBE)
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| Sep 27 20:03 | Global environmental factors impact the evolution of adult hemoglobins in squamata reptiles (lizards and snakes) and terrestrial turtles
by Juan D Carvajal-Castro and others
(GBE)
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| Sep 26 17:03 | Evolution of SL-RNA Genes and Their Splicing Targets in Parasitic Flatworms
by Javier Calvelo and others
(MBE)
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| Sep 26 08:00 | Evolution under vancomycin selection drives divergent collateral sensitivity patterns in Staphylococcus aureus - Kyle J. , et al. (PNAS)
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| Sep 25 17:03 | From Rabl-like architecture to chromosome territories: a conserved developmental transition in animal genomes
by Jing Liu
(MBE)
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| Sep 25 17:03 | Wide diversity and complex evolution of M42 aminopeptidases with contrasted functional properties in Archaea
by Emilie Chagny and others
(MBE)
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| Sep 24 08:00 | Favorable epistasis in ancestral diterpene synthases promoted convergent evolution of a resin acid precursor in conifers - Andrew J. , et al. (PNAS)
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| Sep 24 08:00 | Language models reveal a complex sequence basis for adaptive convergent evolution of protein functions - Zhenqiu Cao, et al. (PNAS)
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| Sep 22 17:03 | Chromosome-level genome assembly of Eden's whale clarifies the taxonomy and speciation of Bryde's whale complex
by Yi-Tao Lin and others
(MBE)
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| Sep 22 17:03 | Tales of a Super Butterfly: Is Vanessa carye a Truly Migrant Species? Unraveling Migration Using Morphological and Genomics Approaches
by Amado Villalobos-Leiva and others
(MBE)
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| Sep 22 14:03 | Inference of Cytochrome P450 Evolutionary History Using Structural and Physicochemical Metrics
by Jamie D Dixson and others
(GBE)
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| Sep 22 14:03 | Phylogenetic Methods Meet Deep Learning
by Svitlana Braichenko and others
(GBE)
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| Sep 22 14:03 | Evolutionary Diversification and Functions of the Candidate Male Killing Gene wmk
by Emilie Lefoulon and others
(GBE)
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| Sep 21 14:03 | Seasonal influenza viruses show distinct adaptive dynamics during growth in chicken eggs
by Kathryn Kistler and Trevor Bedford
(MBE)
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| Sep 21 14:03 | Multiomic analyses reveal the molecular mechanisms of arid adaptation in a desert rodent species
by Shuai Yuan and others
(MBE)
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| Sep 20 17:03 | From binding to catalysis: emergence of a rudimentary enzyme conferring intrinsic antibiotic resistance
by Claudèle Lemay-St-Denis and others
(MBE)
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| Sep 20 17:03 | Deciphering the impact of temperature on pleiotropic consequences of RNA polymerase mutations
by Deniz Ozbilek and others
(MBE)
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| Sep 20 17:03 | Functional determinants and evolutionary consequences of pleiotropy in complex and Mendelian traits
by Yury A Barbitoff and others
(MBE)
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| Sep 20 17:03 | Mitochondrial Impostors: Prevalence and Impacts of NUMTs on Genetic and Evolutionary Studies in Carnivora
by Huiwen Liu and others
(GBE)
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| Sep 19 14:03 | Recurrent Evolutionary Innovations in Rodent and Primate Schlafen Genes
by Joris Mordier and others
(GBE)
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| Sep 19 14:03 | Chromosome-level assembly and annotation of the grey reef shark (Carcharhinus amblyrhynchos) genome
by Carolin Dahms and others
(GBE)
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| Sep 19 08:00 | Correction for Berenbaum, Political and biological reality checks - (PNAS)
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| Sep 18 17:03 | MyESL: A software for evolutionary sparse learning in molecular phylogenetics and genomics
by Maxwell Sanderford and others
(MBE)
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| Sep 17 17:03 | Integrative genotyping and analysis of canine structural variation using long-read and short-read data
by Peter Z Schall and Jeffrey M Kidd
(GBE)
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| Sep 16 14:03 | eccDNABase: a comprehensive and high-quality database for extrachromosomal circular DNA
by Jin-Hao Zhang and others
(MBE)
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| Sep 15 14:03 | Genotype by environment interactions in gene regulation underlie the response to soil drying in the model grassBrachypodium distachyon
by Jie Yun and others
(MBE)
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| Sep 15 14:03 | Large-scale genome analyses provide insights into Hymenoptera evolution
by Chun He and others
(MBE)
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| Sep 15 14:03 | ArthropodPax gene evolution: a role for Vanessa cardui twin of eyeless in eye development
by Ximena Gutiérrez Ramos and Leslie Pick
(MBE)
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| Sep 15 14:03 | Introducing the Y-chromosomal ancestral-like reference sequence - Improving the capture of human evolutionary information
by Zehra Köksal and others
(MBE)
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| Sep 15 14:03 | Loss and Gain of Aqp10 Paralogs with Broad Solute Selectivity in Anguillid Eels
by Ayumi Nagashima and others
(GBE)
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| Sep 14 14:03 | Distinct Evolutionary Signatures of Human Parainfluenza Viruses 2 and 4 Reveal Host Antagonism Divergence and Phylogenetic Discordance
by Stephanie Goya and Alexander L Greninger
(MBE)
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| Sep 14 14:03 | Temperature and Pressure Shaped the Evolution of Antifreeze Proteins in Polar and Deep Sea Zoarcoid Fishes
by Samuel N Bogan and others
(MBE)
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| Sep 13 20:03 | Detecting Introgression in Shallow Phylogenies: How Minor Molecular Clock Deviations Lead to Major Inference Errors
by Xiao-Xu Pang and others
(MBE)
|