Forthcoming Articles

This site is managed by Brian Golding. Note that entries are retained for only thirty days. Currently only GBE, JME, MBE, and PNAS (selected articles), are provided.

Other online access

- Bioinformatics - Biometrika - Evolution - Evol Applications
- GBE - Genome Research - Genetics - J.Bioinfo. & Comp. Biol.
- J.Mol.Evol. - MBE - Mol. Phylogenetics & Evol - Nature
- Nucl. Acids Res. - PNAS - Science - Systematic Biology


Articles added in the last thirty days:

Jun 5 16:00GeneRax: A tool for species tree-aware maximum likelihood based gene family tree inference under gene duplication, transfer, and loss - Benoit Morel, Alexey M Kozlov, Alexandros Stamatakis, Gergely J Szöllősi (MBE)
Jun 4 16:00Collagen sequence analysis reveals evolutionary history of extinct West Indies Nesophontes ('island-shrews') - M Buckley et al. (MBE)
Jun 3 12:00PIQMEE: Bayesian phylodynamic method for analysis of large datasets with duplicate sequences - Veronika Boskova, Tanja Stadler (MBE)
Jun 2 08:00Pervasive Phenotypic Impact of a Large Nonrecombining Introgressed Region in Yeast - Christian Brion et al. (MBE)
May 31 08:00Jointly inferring the dynamics of population size and sampling intensity from molecular sequences - K V Parag, L du Plessis, O G Pybus (MBE)
May 30 08:00Developmental plasticity shapes social traits and selection in a facultatively eusocial bee - Karen M. Kapheim et al. (PNAS)
May 29 20:00Uneven missing data skews phylogenomic relationships within the lories and lorikeets - Brian Tilston Smith, William M Mauck, III, Brett W Benz, Michael J Andersen (GBE)
May 29 08:00Transcriptome-wide comparisons and virulence gene polymorphisms of host-associated genotypes of the cnidarian parasite Ceratonova shasta in salmonids - Gema Alama-Bermejo et al. (GBE)
May 29 08:00Orthologous divergence and paralogous anti-convergence in molecular evolution of triplicated green opsin genes in medaka fish, genus Oryzias - Yoshifumi Matsumoto, Shoji Oda, Hiroshi Mitani, Shoji Kawamura (GBE)
May 29 08:00De novo genome assembly of limpet Bathyacmaea lactea (Gastropoda: Pectinodontidae), the first reference genome of a deep-sea gastropod endemic to cold seeps - Ruoyu Liu et al. (GBE)
May 29 08:00Comparative transcriptomics across nematode life cycles reveal gene expression conservation and correlated evolution in adjacent developmental stages - Min R Lu, Cheng-Kuo Lai, Ben-Yang Liao, Isheng Jason Tsai (GBE)
May 29 08:00Dental calculus as a tool to study the evolution of the mammalian oral microbiome - Jaelle C Brealey et al. (MBE)
May 28 08:00Flexible mixture model approaches that accommodate footprint size variability for robust detection of balancing selection - Xiaoheng Cheng, Michael DeGiorgio (MBE)
May 27 20:00Cultural evolution of conformity and anticonformity - Kaleda Krebs Denton, Yoav Ram, Uri Liberman, Marcus W. Feldman (PNAS)
May 27 08:00Gradients do grow on trees: a linear-time 𝒪 (N)-dimensional gradient for statistical phylogenetics - Xiang Ji et al. (MBE)
May 26 20:00Competition and hybridization drive interspecific territoriality in birds - Jonathan P. Drury, Madeline C. Cowen, Gregory F. Grether (PNAS)
May 26 20:00Tuning environmental timescales to evolve and maintain generalists - Vedant Sachdeva, Kabir Husain, Jiming Sheng, Shenshen Wang, Arvind Murugan (PNAS)
May 25 12:00Complete mitochondrial genome of a gymnosperm, Sitka spruce (Picea sitchensis), indicates a complex physical structure - Shaun D Jackman et al. (GBE)
May 25 12:00Evolution of the insecticide target Rdl in African Anopheles is driven by interspecific and interkaryotypic introgression - Xavier Grau-Bové et al. (MBE)
May 25 08:00Reconstructing the evolutionary history of chromosomal races on islands: a genome-wide analysis of natural house mouse populations - Paolo Franchini et al. (MBE)
May 22 16:00Recurrent loss of abaA, a master regulator of asexual development in filamentous fungi, correlates with changes in genomic and morphological traits - Matthew E Mead et al. (GBE)
May 22 16:00Performance of a priori and a posteriori calibration strategies in divergence time estimation - Alan J S Beavan, Philip C J Donoghue, Mark A Beaumont, Davide Pisani (GBE)
May 22 16:00Sawfly genomes reveal evolutionary acquisitions that fostered the mega-radiation of parasitoid and eusocial Hymenoptera - Jan Philip Oeyen et al. (GBE)
May 21 16:00Fine-scale position effects shape the distribution of inversion breakpoints in Drosophila melanogaster - Jakob McBroome, David Liang, Russell Corbett-Detig (GBE)
May 21 16:00Collateral toxicity limits the evolution of bacterial Release Factor 2 towards total omnipotence - Hind Abdalaal et al. (MBE)
May 21 16:00Chaperone-Mediated Autophagy in the light of evolution: insight from fish - Laury Lescat et al. (MBE)
May 21 16:00The Neandertal Progesterone Receptor - Hugo Zeberg, Janet Kelso, Svante Pääbo (MBE)
May 21 08:00Dynamic Evolution of De Novo DNA Methyltransferases in Rodent and Primate Genomes - Antoine Molaro, Harmit S Malik, Deborah Bourc'his (MBE)
May 20 16:00Viviparous reptile regarded to have temperature-dependent sex determination has old XY chromosomes - Paola Cornejo-Páramo et al. (GBE)
May 20 16:00Chromosomal-level genome assembly of the sea urchin Lytechinus variegatus substantially improves functional genomic analyses - Phillip L Davidson et al. (GBE)
May 20 12:00A near full-length HIV-1 genome from 1966 recovered from formalin-fixed paraffin-embedded tissue - Sophie Gryseels et al. (PNAS)
May 19 16:00Genome assembly of the ragweed leaf beetle: a step forward to better predict rapid evolution of a weed biocontrol agent to environmental novelties - Bouchemousse Sarah, Falquet Laurent, Müller-Schärer Heinz (GBE)
May 19 12:00Ediacaran reorganization of the marine phosphorus cycle - Thomas A. Laakso, Erik A. Sperling, David T. Johnston, Andrew H. Knoll (PNAS)
May 19 12:00An objective Bayesian analysis of life's early start and our late arrival - David Kipping (PNAS)
May 19 12:00Pleiotropy complicates a trade-off between phage resistance and antibiotic resistance - Alita R. Burmeister et al. (PNAS)
May 19 08:00Guppy Y chromosome integrity maintained by incomplete recombination suppression - Iulia Darolti, Alison E Wright, Judith E Mank (GBE)
May 19 08:00Molecular evolutionary analysis of nematode Zona Pellucida (ZP) modules reveals disulfide-bond reshuffling and standalone ZP-C domains - Cameron J Weadick (GBE)
May 18 16:00Ancient genomic regulatory blocks are a source for regulatory gene deserts in vertebrates after whole genome duplications - María Touceda-Suárez et al. (MBE)
May 18 16:00Molecular signatures of placentation and secretion uncovered in Poeciliopsis maternal follicles - Michael W Guernsey et al. (MBE)
May 18 16:00The Evolution of Human Cancer Gene Duplications across Mammals - Marc Tollis, Aika K Schneider-Utaka, Carlo C Maley (MBE)
May 18 16:00Physical constraints on epistasis - Kabir Husain, Arvind Murugan (MBE)
May 18 16:00The architecture of metabolism maximizes biosynthetic diversity in the largest class of fungi - Emile Gluck-Thaler et al. (MBE)
May 17 20:00The Evolutionary Forces Shaping Cis- and Trans-Regulation of Gene Expression within a Population of Outcrossing Plants - Emily B Josephs et al. (MBE)
May 17 16:00Genomic Signature of Shifts in Selection in a Subalpine Ant and Its Physiological Adaptations - Francesco Cicconardi et al. (MBE)
May 16 12:00Tibetan PHD2, an allele with loss-of-function properties - Daisheng Song et al. (PNAS)
May 15 16:00Early metazoan origin and multiple losses of a novel clade of RIM pre-synaptic calcium channel scaffolding protein homologues - Thomas Piekut et al. (GBE)
May 15 16:00Genomic analysis of European Drosophila melanogaster populations reveals longitudinal structure, continent-wide selection, and previously unknown DNA viruses - Martin Kapun et al. (MBE)
May 14 16:00Genomic epidemiology, evolution, and transmission dynamics of porcine deltacoronavirus - Wan-Ting He et al. (MBE)
May 13 20:00Behavioral and environmental contributions to drosophilid social networks - Jacob A. Jezovit, Rebecca Rooke, Jonathan Schneider, Joel D. Levine (PNAS)
May 13 20:00Ancient Genomes Reveal the Evolutionary History and Origin of Cashmere-Producing Goats in China - Yudong Cai et al. (MBE)
May 13 20:00Distinct Expression and Methylation Patterns for Genes with Different Fates following a Single Whole-Genome Duplication in Flowering Plants - Tao Shi et al. (MBE)
May 13 16:00Genomic insights into plastid evolution - Shannon J Sibbald, John M Archibald (GBE)
May 13 16:00Neuronal function and dopamine signaling evolve at high temperature in Drosophila - Ana Marija Jakšić et al. (MBE)
May 12 16:00piRNA and transposon dynamics in Drosophila: a female story - Bastien Saint-Leandre, Pierre Capy, Aurelie Hua-Van, Jonathan Filee (GBE)
May 12 16:00Considering genomic scans for selection as coalescent model choice - Rebecca B Harris, Jeffrey D Jensen (GBE)
May 11 20:00A Triassic stem-salamander from Kyrgyzstan and the origin of salamanders - Rainer R. Schoch, Ralf Werneburg, Sebastian Voigt (PNAS)
May 11 20:00Temporal flexibility of gene regulatory network underlies a novel wing pattern in flies - Héloïse D. Dufour, Shigeyuki Koshikawa, Cédric Finet (PNAS)
May 11 16:00A likelihood approach for uncovering selective sweep signatures from haplotype data - Alexandre M Harris, Michael DeGiorgio (MBE)
May 9 20:00Viral Fitness Determines the Magnitude of Transcriptomic and Epigenomic Reprograming of Defense Responses in Plants - Régis L Corrêa et al. (MBE)
May 9 16:00Plastid Genome Evolution in the subtribe Calypsoinae (Epidendroideae, Orchidaceae) - Zhang-Hai Li et al. (GBE)
May 9 16:00The protector within: Comparative genomics of APSE phages across aphids reveals rampant recombination and diverse toxin arsenals - Jeff Rouïl et al. (GBE)
May 9 16:00Loss of the polyketide synthase StlB results in stalk cell overproduction in Polysphondylium violaceum - Takaaki B Narita et al. (GBE)
May 9 16:00The first draft genome of the plasterer bee Colletes gigas (Hymenoptera: Colletidae: Colletes) - Qing-Song Zhou et al. (GBE)
May 8 20:00Collateral fitness effects of mutations - Jacob D. Mehlhoff et al. (PNAS)
May 8 16:00Ancient hybridization with an unknown population facilitated high altitude adaptation of canids - Ming-Shan Wang et al. (MBE)
May 8 16:00Phylogenetic reconstruction based on synteny block and gene adjacencies - Guénola Drillon et al. (MBE)