Fingerprint
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Input
Please enter the path to a
fasta
file:
Types of Fingerprints
Nucleotides
OR
Amino Acids
Composition
Heterogeneity
Identity
Variability
Scale
: Lowest Variability
to Maximum Variability
Colour max. variable sites
:
Black
White
Heterozygosity
d
N
/d
S
Ratios
Click to select genetic code
1: Standard
2: Vertebrate mitochondrial (mt)
3: Yeast mt.
4: Mold mt.
5: Invertebrate mt.
6: Ciliate nuclear (nu)
7: Echinoderm mt.
8: Euplotid mt.
9: Alternative yeast nu.
10: Ascidian mt.
11: Blepharisma nu.
Naive Empirical Bayes (NEB)
Bayes Empirical Bayes (BEB)
Nucleotide Diversity
Composition
Heterogeneity
Identity
Variability
Scale
: Lowest Variability
to Maximum Variability
Colour max. variable sites
:
Black
White
Heterozygosity
Charges
Acidic
Basic
Hydrophobicity
Solvent Accessibility
Structure
Fingerprint Display Options
Residue Positions
Default
: first residue set to 1 and last residue set to position of last residue in aligned sequence set
First and Last Residue Position
Begins at
To
residues inclusive
Zoom In
From
To
residues inclusive
Height
Default
: 1 inch
inch(es)
Labels
Display File Name(s)
Display Number of Sequences in (each) File
Display Avg. Branch Length
Display Fingerprint Title
Display Fingerprint Legend
Display Sequence Positions
File Output
Place file(s) output to
one
file
Place each file output in its
own
output file